DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
Pa_1_12450 nq SF
  nq PF
gi|158520473|ref|YP_001528343.1| External link 6c SF
  6c PF
gi|126465097|ref|YP_001040206.1| External link 0e SF
  0e PF
gi|134293431|ref|YP_001117167.1| External link 30 SF
  30 PF
gi|126179069|ref|YP_001047034.1| External link 23 SF
  23 PF
gi|126465361|ref|YP_001040470.1| External link 0e SF
  0e PF
gi|14520328|ref|NP_125803.1| External link pb SF
  pb PF
gi|159905301|ref|YP_001548963.1| External link 66 SF
  66 PF
gi|18976379|ref|NP_577736.1| External link pu SF
  pu PF
gi|18976676|ref|NP_578033.1| External link pu SF
  pu PF
gi|170289594|ref|YP_001739832.1| External link 92 SF
  92 PF
gi|150401570|ref|YP_001325336.1| External link 4v SF
  4v PF
gi|120405818|ref|YP_955647.1| External link 28 SF
  28 PF
gi|18312420|ref|NP_559087.1| External link pc SF
  pc PF
gi|57641400|ref|YP_183878.1| External link tk SF
  tk PF
gi|78045081|ref|YP_359689.1| External link c9 SF
  c9 PF
gi|145222457|ref|YP_001133135.1| External link 4h SF
  4h PF
gi|119872939|ref|YP_930946.1| External link 34 SF
  34 PF
gi|78044906|ref|YP_360200.1| External link c9 SF
  c9 PF
gi|29828973|ref|NP_823607.1| External link s9 SF
  s9 PF
gi|91773858|ref|YP_566550.1| External link m9 SF
  m9 PF No hits
gi|11498604|ref|NP_069832.1| External link af SF
  af PF No hits
gi|21229318|ref|NP_635240.1| External link mz SF
  mz PF No hits
gi|73670009|ref|YP_306024.1| External link fu SF
  fu PF No hits
gi|20088978|ref|NP_615053.1| External link ma SF
  ma PF
gi|150400424|ref|YP_001324191.1| External link 57 SF
  57 PF
gi|28379926|ref|NP_786818.1| External link lb SF
  lb PF
gi|126180413|ref|YP_001048378.1| External link 23 SF
  23 PF
gi|116695761|ref|YP_841337.1| External link 2j SF
  2j PF
gi|119382944|ref|YP_914000.1| External link 27 SF
  27 PF
gi|91779398|ref|YP_554606.1| External link b4 SF
  b4 PF
gi|148652108|ref|YP_001279201.1| External link 1v SF
  1v PF
gi|154251290|ref|YP_001412114.1| External link 1e SF
  1e PF No hits
gi|163856810|ref|YP_001631108.1| External link 5y SF
  5y PF
gi|15600800|ref|NP_232430.1| External link vc SF
  vc PF
gi|163857773|ref|YP_001632071.1| External link 5y SF
  5y PF
gi|33601618|ref|NP_889178.1| External link bo SF
  bo PF
gi|73540571|ref|YP_295091.1| External link rl SF
  rl PF
gi|171057504|ref|YP_001789853.1| External link 7i SF
  7i PF
gi|117919723|ref|YP_868915.1| External link 41 SF
  41 PF
gi|91778078|ref|YP_553286.1| External link b4 SF
  b4 PF
gi|192359551|ref|YP_001981630.1| External link 9m SF
  9m PF No hits
gi|33595562|ref|NP_883205.1| External link bp SF
  bp PF
gi|54025470|ref|YP_119712.1| External link nf SF
  nf PF
gi|66770459|ref|YP_245221.1| External link xa SF
  xa PF
gi|27366820|ref|NP_762347.1| External link vv SF
  vv PF
gi|33596207|ref|NP_883850.1| External link bp SF
  bp PF
gi|21233494|ref|NP_639411.1| External link xd SF
  xd PF
gi|161521065|ref|YP_001584492.1| External link 76 SF
  76 PF
gi|37676597|ref|NP_936993.1| External link vb SF
  vb PF