DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: ssDNA-binding transcriptional regulator domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
jgi|ChlNC64A_1|134820|IGS.gm_12_00206 External link h2 SF
  h2 PF
evm.TU.supercontig_249.9 r6 SF
  r6 PF No hits
AC211975.1_FGT001 External link ze SF
  ze PF No hits
jgi|Sorbi1|5061282|Sb10g003170 External link oj SF
  oj PF No hits
jgi|Volca1|86539|fgenesh4_pg.C_scaffold_3000035 External link vo SF
  vo PF No hits
Plasmodium_vivax_SaI-1|ctg_6840|Pv080225|Annotation|Plasmodium_vivax_TIGR| External link vx SF
  vx PF No hits
PFE1025c pl SF
  pl PF No hits
jgi|Sorbi1|5054695|Sb04g004060 External link oj SF
  oj PF No hits
jgi|Sorbi1|5047284|Sb0012s017760 External link oj SF
  oj PF No hits
Gm0032x00013.3 yg SF
  yg PF No hits
AT2G02740.1 External link at SF
  at PF No hits
LOC_Os02g06370.1|12002.m05985|protein External link os SF
  os PF No hits
jgi|Sorbi1|5047285|Sb0012s017770 External link oj SF
  oj PF No hits
AC191145.3_FGT008 External link ze SF
  ze PF No hits
Gm0166x00079 yg SF
  yg PF No hits
jgi|MicpuN2|62160|EuGene.1000010497 External link ij SF
  ij PF No hits
Gm0076x00125 yg SF
  yg PF No hits
83880 External link ra SF
  ra PF No hits
AT1G14410.1 External link ad SF
  ad PF No hits
LOC_Os06g05350.1|12006.m05264|protein External link os SF
  os PF No hits
Gm0251x00019 yg SF
  yg PF No hits
jgi|MicpuC2|30105 External link iq SF
  iq PF No hits
jgi|OstRCC809_1|16248|gw1.16.558.1 External link o8 SF
  o8 PF No hits
AT2G02740.1 External link ad SF
  ad PF No hits
PB000182.02.0 External link fb SF
  fb PF No hits
PKH_101200 External link fw SF
  fw PF No hits
Gm0004x10211 yg SF
  yg PF No hits
29736.m002027 External link rk SF
  rk PF No hits
LOC_Os02g06370.2|12002.m33561|protein External link os SF
  os PF No hits
PB000721.03.0 External link fb SF
  fb PF No hits
AC187056.3_FGT010 External link ze SF
  ze PF No hits
evm.TU.supercontig_1007.4 r6 SF
  r6 PF No hits
137014 External link sj SF
  sj PF No hits
jgi|Chlre3|186648|estExt_fgenesh2_pg.C_70372 External link cy SF
  cy PF No hits
127924 External link tl SF
  tl PF No hits
jgi|Ost9901_3|8400|gwEuk.16.280.1 External link oz SF
  oz PF No hits
jgi|Poptr1_1|420425|gw1.VIII.1853.1 External link pt SF
  pt PF No hits
Gm0032x00013.1 yg SF
  yg PF No hits
PITG_13252 iy SF
  iy PF No hits
jgi|Selmo1|84708|e_gw1.6.1289.1 External link gj SF
  gj PF No hits
Gm0251x00024 yg SF
  yg PF No hits
AT1G71260.1 External link at SF
  at PF No hits
IMGA|AC136286_24.1 External link mw SF
  mw PF No hits
GSVIVP00029003001 vt SF
  vt PF No hits
1372.m00065|PY04488|PY04488| External link py SF
  py PF No hits
Gm0032x00013.2 yg SF
  yg PF No hits
IMGA|AC146854_24.1 External link mw SF
  mw PF No hits
GSPATP00035758001 External link ir SF
  ir PF No hits
jgi|Poptr1_1|414440|gw1.III.1543.1 External link pt SF
  pt PF No hits
AT1G71260.1 External link ad SF
  ad PF No hits