DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
jgi|Poptr1_1|581995|eugene3.13420003 External link pt SF
  pt PF
gi|77361063|ref|YP_340638.1| External link ha SF
  ha PF
gi|167034500|ref|YP_001669731.1| External link 7g SF
  7g PF
gi|104782165|ref|YP_608663.1| External link pq SF
  pq PF
gi|157961940|ref|YP_001501974.1| External link 6t SF
  6t PF
gi|167624015|ref|YP_001674309.1| External link 8l SF
  8l PF
gi|170756051|ref|YP_001781678.1| External link 8f SF
  8f PF
gi|73538457|ref|YP_298824.1| External link rl SF
  rl PF
gi|16127379|ref|NP_421943.1| External link cc SF
  cc PF
gi|157373995|ref|YP_001472595.1| External link 6d SF
  6d PF
gi|153935670|ref|YP_001387917.1| External link 2u SF
  2u PF
gi|160876782|ref|YP_001556098.1| External link 7a SF
  7a PF
gi|153931155|ref|YP_001384380.1| External link 3t SF
  3t PF
gi|170759544|ref|YP_001787520.1| External link 8s SF
  8s PF
gi|153938587|ref|YP_001391424.1| External link 5c SF
  5c PF
gi|114798495|ref|YP_761715.1| External link 54 SF
  54 PF
gi|116252959|ref|YP_768797.1| External link 17 SF
  17 PF
gi|52841444|ref|YP_095243.1| External link x7 SF
  x7 PF
gi|146291962|ref|YP_001182386.1| External link 2a SF
  2a PF
gi|153002064|ref|YP_001367745.1| External link 1a SF
  1a PF
gi|148358799|ref|YP_001250006.1| External link 2w SF
  2w PF
gi|167622761|ref|YP_001673055.1| External link 8l SF
  8l PF
gi|54297169|ref|YP_123538.1| External link le SF
  le PF
gi|24372503|ref|NP_716545.1| External link sl SF
  sl PF
gi|54294156|ref|YP_126571.1| External link lg SF
  lg PF
gi|157960597|ref|YP_001500631.1| External link 6t SF
  6t PF
gi|148380083|ref|YP_001254624.1| External link 0i SF
  0i PF
gi|194364830|ref|YP_002027440.1| External link e9 SF
  e9 PF
gi|126173008|ref|YP_001049157.1| External link 2z SF
  2z PF
gi|120600111|ref|YP_964685.1| External link 4g SF
  4g PF
gi|186476510|ref|YP_001857980.1| External link 90 SF
  90 PF
gi|15890173|ref|NP_355845.1| External link au SF
  au PF
gi|113867624|ref|YP_726113.1| External link 2j SF
  2j PF
gi|152996047|ref|YP_001340882.1| External link 0z SF
  0z PF
gi|17986640|ref|NP_539274.1| External link bm SF
  bm PF
gi|54295354|ref|YP_127769.1| External link lg SF
  lg PF
gi|148559751|ref|YP_001259530.1| External link 1k SF
  1k PF
gi|86357374|ref|YP_469266.1| External link rz SF
  rz PF
gi|90021944|ref|YP_527771.1| External link d0 SF
  d0 PF
gi|116252957|ref|YP_768795.1| External link 17 SF
  17 PF
gi|146337875|ref|YP_001202923.1| External link 26 SF
  26 PF
gi|170724828|ref|YP_001758854.1| External link 88 SF
  88 PF
gi|71736585|ref|YP_277137.1| External link qs SF
  qs PF
gi|157960182|ref|YP_001500216.1| External link 6t SF
  6t PF
gi|86747134|ref|YP_483630.1| External link rj SF
  rj PF
gi|71279037|ref|YP_270914.1| External link lw SF
  lw PF
gi|161525266|ref|YP_001580278.1| External link 76 SF
  76 PF
gi|148256191|ref|YP_001240776.1| External link 42 SF
  42 PF
gi|114798689|ref|YP_758916.1| External link 54 SF
  54 PF
gi|103487458|ref|YP_617019.1| External link ak SF
  ak PF