DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: lambda repressor-like DNA-binding domains.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|186680864|ref|YP_001864060.1| External link 9j SF
  9j PF
gi|116333875|ref|YP_795402.1| External link 52 SF
  52 PF
gi|78186553|ref|YP_374596.1| External link p7 SF
  p7 PF
gi|145219415|ref|YP_001130124.1| External link 1x SF
  1x PF
gi|78187740|ref|YP_375783.1| External link p7 SF
  p7 PF
gi|163839754|ref|YP_001624159.1| External link 7f SF
  7f PF
gi|50842706|ref|YP_055933.1| External link ac SF
  ac PF
gi|182435303|ref|YP_001823022.1| External link 7n SF
  7n PF
gi|152965329|ref|YP_001361113.1| External link 58 SF
  58 PF
gi|116672405|ref|YP_833338.1| External link 1f SF
  1f PF
gi|119716897|ref|YP_923862.1| External link 0j SF
  0j PF
gi|32141280|ref|NP_733681.1| External link sf SF
  sf PF
gi|148643468|ref|YP_001273981.1| External link 1p SF
  1p PF
gi|11499701|ref|NP_070943.1| External link af SF
  af PF
gi|20090666|ref|NP_616741.1| External link ma SF
  ma PF
gi|146305038|ref|YP_001192354.1| External link 02 SF
  02 PF
gi|14520527|ref|NP_126002.1| External link pb SF
  pb PF
gi|73669575|ref|YP_305590.1| External link fu SF
  fu PF
gi|18978166|ref|NP_579523.1| External link pu SF
  pu PF
gi|76802371|ref|YP_327379.1| External link np SF
  np PF
gi|14591505|ref|NP_143586.1| External link ph SF
  ph PF
gi|57641201|ref|YP_183679.1| External link tk SF
  tk PF
gi|21226349|ref|NP_632271.1| External link mz SF
  mz PF
gi|55377330|ref|YP_135180.1| External link hm SF
  hm PF
gi|110668570|ref|YP_658381.1| External link 1w SF
  1w PF
gi|170290597|ref|YP_001737413.1| External link 7v SF
  7v PF
gi|162449406|ref|YP_001611773.1| External link 60 SF
  60 PF
gi|159898132|ref|YP_001544379.1| External link 5u SF
  5u PF
gi|121634852|ref|YP_975097.1| External link 19 SF
  19 PF
gi|90421626|ref|YP_529996.1| External link rg SF
  rg PF
gi|115522503|ref|YP_779414.1| External link 5k SF
  5k PF
gi|121605836|ref|YP_983165.1| External link 01 SF
  01 PF
gi|148252332|ref|YP_001236917.1| External link 42 SF
  42 PF
gi|153000378|ref|YP_001366059.1| External link 1a SF
  1a PF
gi|145599733|ref|YP_001163809.1| External link 5h SF
  5h PF
gi|15829528|ref|NP_308301.1| External link eo SF
  eo PF
gi|16121519|ref|NP_404832.1| External link yp SF
  yp PF
gi|50914370|ref|YP_060342.1| External link sp SF
  sp PF
gi|56708449|ref|YP_170345.1| External link ft SF
  ft PF
gi|148547010|ref|YP_001267112.1| External link 0a SF
  0a PF
gi|77459882|ref|YP_349389.1| External link pn SF
  pn PF
gi|88195767|ref|YP_500576.1| External link aq SF
  aq PF
gi|160897066|ref|YP_001562648.1| External link 7d SF
  7d PF
gi|28209943|ref|NP_780887.1| External link te SF
  te PF
gi|22537417|ref|NP_688268.1| External link s4 SF
  s4 PF
gi|91210315|ref|YP_540301.1| External link e2 SF
  e2 PF
gi|22126831|ref|NP_670254.1| External link yk SF
  yk PF
gi|150394533|ref|YP_001317208.1| External link 1i SF
  1i PF
gi|190149742|ref|YP_001968267.1| External link d9 SF
  d9 PF
gi|83593475|ref|YP_427227.1| External link rb SF
  rb PF