DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|91780952|ref|YP_556159.1| External link b4 SF
  b4 PF
gi|126641901|ref|YP_001084885.1| External link 1l SF
  1l PF
gi|152997197|ref|YP_001342032.1| External link 0z SF
  0z PF
gi|169795806|ref|YP_001713599.1| External link 7t SF
  7t PF
gi|184158288|ref|YP_001846627.1| External link 99 SF
  99 PF
jgi|Poptr1_1|587002|eugene3.205180001 External link pt SF
  pt PF
gi|29831854|ref|NP_826488.1| External link s9 SF
  s9 PF
gi|70730844|ref|YP_260585.1| External link qf SF
  qf PF
gi|187735336|ref|YP_001877448.1| External link 9a SF
  9a PF
gi|146339059|ref|YP_001204107.1| External link 26 SF
  26 PF
gi|13476782|ref|NP_108351.1| External link mk SF
  mk PF
gi|86748203|ref|YP_484699.1| External link rj SF
  rj PF
gi|150018042|ref|YP_001310296.1| External link 03 SF
  03 PF
gi|78060675|ref|YP_367250.1| External link bk SF
  bk PF
gi|148254179|ref|YP_001238764.1| External link 42 SF
  42 PF
gi|159043331|ref|YP_001532125.1| External link 6q SF
  6q PF
gi|116686482|ref|YP_839729.1| External link 5l SF
  5l PF
gi|161523047|ref|YP_001585976.1| External link 76 SF
  76 PF
gi|157370711|ref|YP_001478700.1| External link 7e SF
  7e PF
gi|78358511|ref|YP_389960.1| External link ds SF
  ds PF
gi|170725224|ref|YP_001759250.1| External link 88 SF
  88 PF
gi|107028486|ref|YP_625581.1| External link b6 SF
  b6 PF
gi|116621700|ref|YP_823856.1| External link 25 SF
  25 PF
gi|160900728|ref|YP_001566310.1| External link 7d SF
  7d PF
gi|170735082|ref|YP_001774196.1| External link 7j SF
  7j PF
gi|94970484|ref|YP_592532.1| External link a3 SF
  a3 PF
gi|116252730|ref|YP_768568.1| External link 17 SF
  17 PF
gi|60681470|ref|YP_211614.1| External link fl SF
  fl PF
gi|157369634|ref|YP_001477623.1| External link 7e SF
  7e PF
gi|156975873|ref|YP_001446780.1| External link 65 SF
  65 PF
gi|146299775|ref|YP_001194366.1| External link 1z SF
  1z PF
gi|115358792|ref|YP_775930.1| External link 0u SF
  0u PF
gi|172063522|ref|YP_001811173.1| External link 85 SF
  85 PF
gi|146339382|ref|YP_001204430.1| External link 26 SF
  26 PF
gi|117921806|ref|YP_870998.1| External link 41 SF
  41 PF
gi|146302056|ref|YP_001196647.1| External link 1z SF
  1z PF
gi|186475060|ref|YP_001856530.1| External link 90 SF
  90 PF
gi|91781689|ref|YP_556895.1| External link b4 SF
  b4 PF
gi|153008414|ref|YP_001369629.1| External link 40 SF
  40 PF
gi|113969102|ref|YP_732895.1| External link 0f SF
  0f PF
gi|118467610|ref|YP_884881.1| External link 3e SF
  3e PF
gi|90425836|ref|YP_534206.1| External link rg SF
  rg PF
gi|110634458|ref|YP_674666.1| External link 0p SF
  0p PF
gi|115526420|ref|YP_783331.1| External link 5k SF
  5k PF
gi|16077285|ref|NP_388098.1| External link bs SF
Gene name: ybfA  bs PF
gi|114048755|ref|YP_739305.1| External link 24 SF
  24 PF
gi|170747404|ref|YP_001753664.1| External link 7w SF
  7w PF
gi|169628231|ref|YP_001701880.1| External link 8c SF
  8c PF
30163.m001328 External link rk SF
  rk PF
gi|91789231|ref|YP_550183.1| External link p6 SF
  p6 PF