DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: Nucleic acid-binding proteins.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
jgi|Emihu1|470692|estExtDG_fgeneshEH_pg.C_5230006 External link ex SF
  ex PF
jgi|Emihu1|463684|estExtDG_fgeneshEH_pg.C_310094 External link ex SF
  ex PF
FBpp0206415 External link dz SF
  dz PF
jgi|Auran1|64934 External link a6 SF
  a6 PF
gi|182677540|ref|YP_001831686.1| External link 8q SF
  8q PF
gi|115725199|ref|XP_788422.2| External link tu SF
  tu PF
jgi|Auran1|61106 External link a6 SF
  a6 PF
AT2G17870.1 External link at SF
  at PF
AT2G17870.1 External link ad SF
  ad PF
AP006113_41.1 External link jp SF
  jp PF
Gm0058x00059 yg SF
  yg PF
AT4G38680.1 External link ad SF
  ad PF
Gm0104x00043 yg SF
  yg PF
AT4G38680.1 External link at SF
  at PF
29908.m006148 External link rk SF
  rk PF
gi|93005152|ref|YP_579589.1| External link pz SF
  pz PF
gi|71064869|ref|YP_263596.1| External link ri SF
  ri PF
scaffold_16.17 External link nk SF
  nk PF
ENSGALP00000039235 External link gg SF
  gg PF
ENSMUSP00000071834 External link mh SF
  mh PF
ENSBTAP00000000901 External link bv SF
  bv PF
ENSMODP00000005770 External link oo SF
  oo PF
ENSP00000351329 External link hs SF
  hs PF
jgi|Nemve1|105520|e_gw.77.31.1 External link nw SF
  nw PF
ENSP00000342408 External link hs SF
  hs PF
ENSDARP00000083965 External link da SF
  da PF
ENSRNOP00000032423 External link ro SF
  ro PF
ENSSARP00000000680 External link xr SF
  xr PF
ENSECAP00000018826 External link eq SF
  eq PF
ENSRNOP00000051275 External link rn SF
  rn PF
ENSMUSP00000029446 External link mm SF
  mm PF
ENSP00000358546 External link hs SF
  hs PF
ENSCAFP00000014163 External link dg SF
  dg PF
ENSGACP00000006002 External link g1 SF
  g1 PF
ENSGALP00000003340 External link gh SF
  gh PF
ENSSARP00000000680 External link xb SF
  xb PF
ENSGALP00000003340 External link gg SF
  gg PF
ENSBTAP00000000903 External link bv SF
  bv PF
ENSORLP00000000878 External link o1 SF
  o1 PF
ENSP00000358546 External link ht SF
  ht PF
ENSMUSP00000071834 External link mm SF
  mm PF
ENSP00000358543 External link hs SF
  hs PF
ENSORLP00000000878 External link ol SF
  ol PF
ENSP00000261443 External link hs SF
Gene name: CSDE1  hs PF
ENSPPYP00000001162 External link of SF
  of PF
ENSDARP00000083965 External link df SF
  df PF
ENSECAP00000018787 External link eq SF
  eq PF
ENSMMUP00000002634 External link ru SF
  ru PF
ENSRNOP00000032423 External link rn SF
  rn PF
ENSMODP00000005770 External link op SF
  op PF