DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|108805996|ref|YP_645933.1| External link rw SF
  rw PF No hits
30173.m001139 External link rk SF
  rk PF
gi|170781739|ref|YP_001710071.1| External link 87 SF
  87 PF
gi|182435488|ref|YP_001823207.1| External link 7n SF
  7n PF
gi|76788394|ref|YP_330476.1| External link a9 SF
  a9 PF
gi|22538060|ref|NP_688911.1| External link s4 SF
  s4 PF
gi|29828977|ref|NP_823611.1| External link s9 SF
  s9 PF
gi|25011948|ref|NP_736343.1| External link s5 SF
  s5 PF
gi|73669401|ref|YP_305416.1| External link fu SF
  fu PF No hits
jgi|ChlNC64A_1|138131|IGS.gm_2_00598 External link h2 SF
  h2 PF
gi|126180404|ref|YP_001048369.1| External link 23 SF
  23 PF
gi|154150644|ref|YP_001404262.1| External link 3p SF
  3p PF
gi|126178732|ref|YP_001046697.1| External link 23 SF
  23 PF No hits
30224.m006430 External link rk SF
  rk PF
gi|46199189|ref|YP_004856.1| External link t0 SF
  t0 PF
gi|55981218|ref|YP_144515.1| External link tr SF
  tr PF
gi|78060698|ref|YP_367273.1| External link bk SF
  bk PF
gi|121609454|ref|YP_997261.1| External link 4b SF
  4b PF No hits
gi|110634652|ref|YP_674860.1| External link 0p SF
  0p PF
gi|116692396|ref|YP_837929.1| External link 5l SF
  5l PF
gi|170735602|ref|YP_001776862.1| External link 7j SF
  7j PF
gi|161520850|ref|YP_001584277.1| External link 76 SF
  76 PF
gi|107026415|ref|YP_623926.1| External link b6 SF
  b6 PF
ACYPI43105-PA External link qp SF
  qp PF
gi|78062562|ref|YP_372470.1| External link bk SF
  bk PF
gi|115358470|ref|YP_775608.1| External link 0u SF
  0u PF
gi|172063225|ref|YP_001810876.1| External link 85 SF
  85 PF
gi|62391905|ref|YP_227307.1| External link cb SF
  cb PF
gi|145297048|ref|YP_001139869.1| External link 4e SF
  4e PF
gi|29830244|ref|NP_824878.1| External link s9 SF
  s9 PF
gi|134293540|ref|YP_001117276.1| External link 30 SF
  30 PF
gi|111019984|ref|YP_702956.1| External link 3r SF
  3r PF
jgi|Poptr1_1|594749|eugene3.66150001 External link pt SF
  pt PF
gi|163840068|ref|YP_001624473.1| External link 7f SF
  7f PF
gi|73539134|ref|YP_299501.1| External link rl SF
  rl PF
gi|157372162|ref|YP_001480151.1| External link 7e SF
  7e PF
gi|76819377|ref|YP_337534.1| External link bz SF
  bz PF
gi|56476464|ref|YP_158053.1| External link az SF
  az PF
gi|157155495|ref|YP_001465511.1| External link 6l SF
  6l PF
gi|153011755|ref|YP_001372969.1| External link 40 SF
  40 PF
gi|52787750|ref|YP_093579.1| External link lc SF
  lc PF
gi|39937618|ref|NP_949894.1| External link rd SF
  rd PF
gi|55378688|ref|YP_136538.1| External link hm SF
  hm PF
gi|33591812|ref|NP_879456.1| External link be SF
  be PF
gi|110807759|ref|YP_691279.1| External link 3s SF
  3s PF
gi|152971886|ref|YP_001336995.1| External link 2k SF
  2k PF
gi|33599759|ref|NP_887319.1| External link bo SF
  bo PF
gi|148549553|ref|YP_001269655.1| External link 0a SF
  0a PF
gi|66045573|ref|YP_235414.1| External link ud SF
  ud PF
gi|134101801|ref|YP_001107462.1| External link 18 SF
  18 PF