DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: SRF-like.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
evm.TU.supercontig_30.148 r6 SF
  r6 PF
GSVIVP00006101001 vt SF
  vt PF
GSVIVP00019739001 vt SF
  vt PF
jgi|Sorbi1|5055926|Sb04g033930 External link oj SF
  oj PF
evm.TU.supercontig_265.5 r6 SF
  r6 PF
ENSPTRP00000043478 External link xq SF
  xq PF
jgi|Triat1|82096|fgenesh1_pm.C_scaffold_11000062 External link wt SF
  wt PF
evm.TU.supercontig_347.5 r6 SF
  r6 PF
AT1G77080.4 External link at SF
  at PF
AC211189.1_FGT001 External link ze SF
  ze PF
Gm0138x00045 yg SF
  yg PF
AT1G22590.2 External link ad SF
  ad PF
evm.TU.contig_37906.1 r6 SF
  r6 PF
AT1G77080.2 External link at SF
  at PF
ENSMMUP00000021949 External link r2 SF
  r2 PF
jgi|Poptr1_1|258177|gw1.XVII.168.1 External link pt SF
  pt PF
evm.TU.contig_46342.1 r6 SF
  r6 PF
LOC_Os04g25920.1|12004.m07718|protein External link os SF
  os PF No hits
ENSMMUP00000021949 External link ru SF
  ru PF
AT1G65330.1 External link at SF
  at PF
evm.TU.supercontig_185.9 r6 SF
  r6 PF
jgi|Picst3|68747|estExt_genewise1_human.C_chr_1.10329 External link ip SF
  ip PF
evm.TU.supercontig_18.166 r6 SF
  r6 PF
Gm0258x00031 yg SF
  yg PF
AT5G65050.1 External link at SF
  at PF
ENSTRUP00000002099 External link to SF
  to PF
AC200420.3_FGT014 External link ze SF
  ze PF
ENSSTOP00000001678 External link g3 SF
  g3 PF
Gm0108x10006 yg SF
  yg PF
evm.TU.contig_25253.1 r6 SF
  r6 PF
evm.TU.supercontig_185.12 r6 SF
  r6 PF
sgtc|cn14005 n1 SF
  n1 PF
evm.TU.contig_37400.1 r6 SF
  r6 PF
AT1G65300.1 External link ad SF
  ad PF
Gm0231x00005.1 yg SF
  yg PF
AT2G26320.1 External link ad SF
  ad PF
ENSTRUP00000047642 External link to SF
  to PF
ENSTRUP00000011862 External link to SF
  to PF
ENSCINP00000001151 External link is SF
  is PF
jgi|Selmo1|91791|e_gw1.12.114.1 External link gj SF
  gj PF
jgi|Trive1|62106|fgenesh1_pg.C_scaffold_3000319 External link nj SF
  nj PF
GSVIVP00004864001 vt SF
  vt PF
ENSMMUP00000021952 External link ru SF
  ru PF
evm.TU.supercontig_185.11 r6 SF
  r6 PF
RO3G_06615.1 ry SF
  ry PF
evm.TU.contig_33457.1 r6 SF
  r6 PF No hits
Gm0154x00027 yg SF
  yg PF
ENSOGAP00000006073 External link o4 SF
  o4 PF
evm.TU.contig_34044.1 r6 SF
  r6 PF
FBpp0087529 External link dd SF
  dd PF