DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: Homeodomain-like.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
PITG_19220 iy SF
  iy PF
85385 External link ra SF
  ra PF
134456 External link sj SF
  sj PF
jgi|Sorbi1|5053702|Sb03g034510 External link oj SF
  oj PF
LOC_Os06g12400.1|12006.m05957|protein External link os SF
  os PF
LOC_Os02g05450.1|12002.m05893|protein External link os SF
  os PF
IMGA|AC123547_12.1 External link mw SF
  mw PF
Gm0084x00111 yg SF
  yg PF
GSVIVP00009253001 vt SF
  vt PF
evm.TU.supercontig_95.11 r6 SF
  r6 PF
jgi|Poptr1_1|826053|estExt_fgenesh4_pg.C_LG_XVIII1192 External link pt SF
  pt PF
jgi|Phypa1_1|170895|estExt_fgenesh1_pg.C_2670037 External link pw SF
  pw PF
Gm0025x00498 yg SF
  yg PF
AC209365.1_FGT025 External link ze SF
  ze PF
jgi|Ost9901_3|89717|ost_20_007_029 External link oz SF
  oz PF
jgi|Poptr1_1|560666|eugene3.00060625 External link pt SF
  pt PF
jgi|Sorbi1|5054671|Sb04g003450 External link oj SF
  oj PF
28152.m000873 External link rk SF
  rk PF
29671.m000294 External link rk SF
  rk PF
jgi|MicpuC2|59356 External link iq SF
  iq PF
PTRG_02671 t4 SF
  t4 PF No hits
scaffold_1033.4 External link nk SF
  nk PF
AN2691.2 an SF
  an PF
ATEG_05203 gi SF
  gi PF
scaffold_7.50 External link nk SF
  nk PF
(SNU15627.1) nd SF
  nd PF
29085.m001169 hz SF
  hz PF
scaffold_1029.2 External link nk SF
  nk PF
scaffold_31.44 External link nk SF
  nk PF
scaffold_70.30 External link nk SF
  nk PF
jgi|MicpuC2|49061 External link iq SF
  iq PF
jgi|Brafl1|121689|estExt_fgenesh2_pg.C_700137 External link bf SF
  bf PF
ENSMODP00000000759 External link op SF
  op PF
ENSMODP00000002481 External link oo SF
  oo PF
ENSPTRP00000052157 External link xp SF
  xp PF
ENSGALP00000033850 External link gg SF
  gg PF
ENSP00000297857 External link ht SF
Gene name: ZHX1  ht PF
ENSGALP00000026367 External link gh SF
  gh PF
gi|148233976|ref|NP_001085658| External link xl SF
  xl PF
ENSRNOP00000008454 External link ro SF
  ro PF
ENSBTAP00000023393 External link bv SF
  bv PF
ENSSARP00000008130 External link xr SF
  xr PF
ENSPPYP00000021156 External link o5 SF
  o5 PF
ENSBTAP00000020381 External link bv SF
  bv PF
ENSMUSP00000045019 External link mm SF
Gene name: Zhx3  mm PF
ENSMLUP00000009313 External link lu SF
  lu PF
ENSOCUP00000005562 External link ok SF
  ok PF
ENSXETP00000042167 External link xn SF
  xn PF
ENSOGAP00000011975 External link o4 SF
  o4 PF
jgi|Brafl1|123093|estExt_fgenesh2_pg.C_1090075 External link bf SF
  bf PF