DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Ribbon-helix-helix.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|134099198|ref|YP_001104859.1| External link 18 SF
  18 PF No hits
gi|182436289|ref|YP_001824008.1| External link 7n SF
  7n PF No hits
gi|148262917|ref|YP_001229623.1| External link 3g SF
  3g PF
gi|167034397|ref|YP_001669628.1| External link 7g SF
  7g PF
gi|194451608|ref|YP_002044353.1| External link 9r SF
  9r PF
gi|23098339|ref|NP_691805.1| External link oi SF
  oi PF No hits
gi|189500885|ref|YP_001960355.1| External link 9e SF
  9e PF No hits
gi|119385013|ref|YP_916069.1| External link 27 SF
  27 PF
gi|15830810|ref|NP_309583.1| External link eo SF
  eo PF
gi|170722922|ref|YP_001750610.1| External link 8v SF
  8v PF
gi|15841423|ref|NP_336460.1| External link mu SF
  mu PF No hits
gi|15801288|ref|NP_287305.1| External link e1 SF
  e1 PF No hits
gi|138894033|ref|YP_001124486.1| External link 1u SF
  1u PF No hits
gi|118580862|ref|YP_902112.1| External link 3c SF
  3c PF
gi|37526215|ref|NP_929559.1| External link pd SF
  pd PF No hits
gi|121610691|ref|YP_998498.1| External link 4b SF
  4b PF No hits
gi|148661760|ref|YP_001283283.1| External link 4q SF
  4q PF No hits
gi|119717679|ref|YP_924644.1| External link 0j SF
  0j PF
gi|56477391|ref|YP_158980.1| External link az SF
  az PF No hits
gi|120610400|ref|YP_970078.1| External link 4t SF
  4t PF
gi|186686470|ref|YP_001869666.1| External link 9j SF
  9j PF No hits
gi|117927547|ref|YP_872098.1| External link 3q SF
  3q PF
gi|71065587|ref|YP_264314.1| External link ri SF
  ri PF
gi|134293243|ref|YP_001116979.1| External link 30 SF
  30 PF
gi|186685540|ref|YP_001868736.1| External link 9j SF
  9j PF
gi|153954628|ref|YP_001395393.1| External link 16 SF
  16 PF
gi|148546685|ref|YP_001266787.1| External link 0a SF
  0a PF
gi|169633441|ref|YP_001707177.1| External link 7l SF
  7l PF
gi|157370889|ref|YP_001478878.1| External link 7e SF
  7e PF No hits
gi|145219427|ref|YP_001130136.1| External link 1x SF
  1x PF No hits
gi|152988671|ref|YP_001347790.1| External link 4j SF
  4j PF No hits
gi|158338994|ref|YP_001520171.1| External link 81 SF
  81 PF No hits
gi|152986951|ref|YP_001347128.1| External link 4j SF
  4j PF
gi|28869052|ref|NP_791671.1| External link pj SF
  pj PF
gi|116052588|ref|YP_792903.1| External link 2t SF
  2t PF
gi|120554642|ref|YP_958993.1| External link 1n SF
  1n PF No hits
gi|120599264|ref|YP_963838.1| External link 4g SF
  4g PF
gi|116332741|ref|YP_794268.1| External link 52 SF
  52 PF No hits
28136.m000103 External link rk SF
  rk PF No hits
gi|162149112|ref|YP_001603573.1| External link 7c SF
  7c PF No hits
gi|62391674|ref|YP_227076.1| External link cb SF
  cb PF No hits
gi|119382861|ref|YP_913917.1| External link 27 SF
  27 PF No hits
gi|30063894|ref|NP_838065.1| External link fs SF
  fs PF No hits
gi|21223410|ref|NP_629189.1| External link sf SF
  sf PF No hits
gi|73543136|ref|YP_297656.1| External link rl SF
  rl PF No hits
gi|114566122|ref|YP_753276.1| External link 2l SF
  2l PF
gi|150004548|ref|YP_001299292.1| External link 0r SF
  0r PF No hits
gi|116618320|ref|YP_818691.1| External link 2s SF
  2s PF
gi|163868138|ref|YP_001609342.1| External link 6u SF
  6u PF
gi|170731343|ref|YP_001776776.1| External link 8o SF
  8o PF No hits