DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|162447418|ref|YP_001620550.1| External link 8b SF
  8b PF
gi|163839598|ref|YP_001624003.1| External link 7f SF
  7f PF
gi|158520359|ref|YP_001528229.1| External link 6c SF
  6c PF
gi|116331582|ref|YP_801300.1| External link 3h SF
  3h PF
gi|86609727|ref|YP_478489.1| External link c7 SF
  c7 PF
gi|157737973|ref|YP_001490657.1| External link 6k SF
  6k PF
gi|116249881|ref|YP_765719.1| External link 17 SF
  17 PF
gi|77165885|ref|YP_344410.1| External link nr SF
  nr PF
gi|153011494|ref|YP_001372708.1| External link 40 SF
  40 PF
gi|167630485|ref|YP_001680984.1| External link 8j SF
  8j PF
gi|72381917|ref|YP_291272.1| External link oc SF
  oc PF
gi|160881933|ref|YP_001560901.1| External link 5z SF
  5z PF
gi|87160545|ref|YP_494144.1| External link a2 SF
  a2 PF
gi|117626313|ref|YP_859636.1| External link 1j SF
  1j PF
gi|23098360|ref|NP_691826.1| External link oi SF
  oi PF
gi|71279086|ref|YP_268317.1| External link lw SF
  lw PF
gi|33602916|ref|NP_890476.1| External link bo SF
  bo PF
gi|124023445|ref|YP_001017752.1| External link 3u SF
  3u PF
gi|38704227|ref|NP_313056.2| External link eo SF
  eo PF
gi|39996481|ref|NP_952432.1| External link gs SF
  gs PF
gi|183222199|ref|YP_001840195.1| External link 83 SF
  83 PF
gi|74314540|ref|YP_312959.1| External link on SF
  on PF
gi|145299747|ref|YP_001142588.1| External link 44 SF
  44 PF
gi|53803565|ref|YP_114738.1| External link mt SF
  mt PF No hits
gi|66769074|ref|YP_243836.1| External link xa SF
  xa PF
gi|152964851|ref|YP_001360635.1| External link 58 SF
  58 PF
gi|37679198|ref|NP_933807.1| External link vb SF
  vb PF
gi|150015992|ref|YP_001308246.1| External link 03 SF
  03 PF
gi|156503305|ref|YP_001429370.1| External link 7b SF
  7b PF
gi|91790439|ref|YP_551391.1| External link p6 SF
  p6 PF
gi|186472213|ref|YP_001859555.1| External link 90 SF
  90 PF
gi|89895668|ref|YP_519155.1| External link d2 SF
  d2 PF
gi|78777470|ref|YP_393785.1| External link ti SF
  ti PF
gi|49481288|ref|YP_038338.1| External link ko SF
  ko PF
gi|159040650|ref|YP_001539902.1| External link 6n SF
  6n PF
gi|147669934|ref|YP_001214752.1| External link 10 SF
  10 PF
gi|145224037|ref|YP_001134715.1| External link 4h SF
  4h PF
gi|78214070|ref|YP_382849.1| External link so SF
  so PF
gi|27468159|ref|NP_764796.1| External link s3 SF
  s3 PF
gi|91775586|ref|YP_545342.1| External link m7 SF
  m7 PF
gi|157363630|ref|YP_001470397.1| External link 5v SF
  5v PF
gi|21283181|ref|NP_646269.1| External link s1 SF
  s1 PF
gi|116331205|ref|YP_800923.1| External link 3h SF
  3h PF
gi|146297426|ref|YP_001181197.1| External link 1q SF
  1q PF
gi|163859114|ref|YP_001633412.1| External link 5y SF
  5y PF
gi|124386241|ref|YP_001027218.1| External link 38 SF
  38 PF
gi|148251693|ref|YP_001236278.1| External link 42 SF
  42 PF
gi|182436110|ref|YP_001823829.1| External link 7n SF
  7n PF
gi|125717540|ref|YP_001034673.1| External link 5b SF
  5b PF
gi|89900839|ref|YP_523310.1| External link rx SF
  rx PF No hits