DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: p53-like transcription factors.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
gi|16079901|ref|NP_390727.1| External link bs SF
Gene name: uvrC  bs PF
gi|154686983|ref|YP_001422144.1| External link 2o SF
  2o PF
gi|52786728|ref|YP_092557.1| External link lc SF
  lc PF
gi|52081351|ref|YP_080142.1| External link lf SF
  lf PF
LOC_Os02g55350.1|12002.m10561|protein External link os SF
  os PF
LOC_Os07g26780.1|12007.m06955|protein External link os SF
  os PF
LOC_Os12g25040.1|12012.m06332|protein External link os SF
  os PF
gi|125972682|ref|YP_001036592.1| External link 4x SF
  4x PF
ENSCSAVP00000005128 External link c0 SF
  c0 PF
ENSBTAP00000039579 External link bv SF
  bv PF
FBpp0219224 External link dw SF
  dw PF
FBpp0207763 External link dz SF
  dz PF
FBpp0284786 External link do SF
  do PF
scaffold_565.11 External link nk SF
  nk PF
ENSTRUP00000010370 External link to SF
  to PF
ENSOPRP00000004807 External link oq SF
  oq PF
ENSTBEP00000003080 External link t2 SF
  t2 PF
ENSSTOP00000010277 External link g3 SF
  g3 PF
ENSSTOP00000010277 External link gb SF
  gb PF
ENSOPRP00000004807 External link ow SF
  ow PF
ENSTBEP00000003080 External link tz SF
  tz PF
ENSOANP00000028213 External link o2 SF
  o2 PF
ENSPPYP00000013821 External link of SF
  of PF
ENSTBEP00000004102 External link tz SF
  tz PF
jgi|Helro1|77620 External link hx SF
  hx PF
ENSGALP00000009054 External link gh SF
  gh PF
ENSGALP00000009054 External link gg SF
  gg PF
ENSOGAP00000012644 External link o4 SF
  o4 PF
ENSOANP00000010008 External link oh SF
  oh PF
ENSOGAP00000012644 External link ob SF
  ob PF
ENSMUSP00000094041 External link mm SF
  mm PF
ENSOANP00000028213 External link oh SF
  oh PF
ENSCSAVP00000008152 External link c0 SF
  c0 PF
ENSOANP00000010008 External link o2 SF
  o2 PF
ENSFCAP00000007427 External link fe SF
  fe PF
ENSTBEP00000004102 External link t2 SF
  t2 PF
ENSFCAP00000007427 External link f1 SF
  f1 PF
CBP09716 External link cw SF
  cw PF
LOC_Os11g24990.1|12011.m06423|protein External link os SF
  os PF
LOC_Os12g17620.1|12012.m05719|protein External link os SF
  os PF
LOC_Os06g27880.1|12006.m07333|protein External link os SF
  os PF No hits
LOC_Os08g25190.1|12008.m06537|protein External link os SF
  os PF
LOC_Os07g11680.1|12007.m05622|protein External link os SF
  os PF
LOC_Os06g29270.1|12006.m07471|protein External link os SF
  os PF
LOC_Os11g14090.1|12011.m05547|protein External link os SF
  os PF
LOC_Os04g22570.1|12004.m07405|protein External link os SF
  os PF
LOC_Os12g20240.1|12012.m05970|protein External link os SF
  os PF
LOC_Os11g28400.1|12011.m06758|protein External link os SF
  os PF
LOC_Os09g02950.1|12009.m03667|protein External link os SF
  os PF
LOC_Os07g22960.1|12007.m06579|protein External link os SF
  os PF