DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: HLH, helix-loop-helix DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
jgi|Selmo1|411158|fgenesh2_pg.C_scaffold_14000211 External link gj SF
  gj PF
AT1G12860.1 External link ad SF
  ad PF
AT1G12860.1 External link at SF
  at PF
jgi|Brafl1|132230|estExt_fgenesh2_pg.C_6580007 External link bf SF
  bf PF
evm.TU.supercontig_537.2 r6 SF
  r6 PF
scaffold_187.13 External link nk SF
  nk PF
LOC_Os03g12940.2|12003.m78849|protein External link os SF
  os PF
LOC_Os03g12940.1|12003.m06741|protein External link os SF
  os PF
jgi|Pospl1|126927|estExt_fgenesh3_pg.C_140149 External link ia SF
  ia PF
jgi|Pospl1|96125|fgenesh3_pg.187__25 External link ia SF
  ia PF
jgi|Pospl1|105591|fgenesh3_pg.138__48 External link ia SF
  ia PF
ENSEEUP00000004231 External link e4 SF
  e4 PF
ENSEEUP00000004231 External link ek SF
  ek PF
jgi|Pospl1|126474|estExt_fgenesh3_pg.C_600033 External link ia SF
  ia PF
jgi|Brafl1|89894|fgenesh2_pg.scaffold_191000072 External link bf SF
  bf PF
ENSMLUP00000015197 External link lu SF
  lu PF
ENSGACP00000018778 External link gc SF
  gc PF
ENSETEP00000014003 External link ee SF
  ee PF
ENSMICP00000009340 External link io SF
  io PF
ENSBTAP00000040463 External link bv SF
  bv PF
ENSFCAP00000010828 External link f1 SF
  f1 PF
ENSTRUP00000037385 External link tq SF
  tq PF
ENSGACP00000018778 External link g1 SF
  g1 PF
ENSMLUP00000015197 External link l2 SF
  l2 PF
ENSFCAP00000010828 External link fe SF
  fe PF
ENSSARP00000012816 External link xr SF
  xr PF
ENSBTAP00000040463 External link bw SF
  bw PF
ENSMICP00000009340 External link i2 SF
  i2 PF
ENSTRUP00000037385 External link to SF
  to PF
ENSSARP00000012816 External link xb SF
  xb PF
ENSCAFP00000022009 External link dg SF
  dg PF
ENSETEP00000014003 External link e3 SF
  e3 PF
ENSBTAP00000027846 External link bv SF
  bv PF
ENSBTAP00000027846 External link bw SF
  bw PF
ENSTBEP00000004286 External link tz SF
  tz PF
FBpp0151522 External link gd SF
  gd PF
ENSTBEP00000004286 External link t2 SF
  t2 PF
74602 External link ra SF
  ra PF
jgi|Phatr2|44962|estExt_fgenesh1_pg.C_chr_50318 External link hr SF
  hr PF
PITG_12760 iy SF
  iy PF
29983.m003179 External link rk SF
  rk PF
jgi|Phypa1_1|171589|estExt_fgenesh1_pg.C_3000052 External link pw SF
  pw PF
jgi|Phypa1_1|167852|estExt_fgenesh1_pg.C_1590022 External link pw SF
  pw PF
scaffold_597.2 External link nk SF
  nk PF
scaffold_49.53 External link nk SF
  nk PF
scaffold_981.5 External link nk SF
  nk PF
Translation:4279 ie SF
  ie PF
GSVIVP00038527001 vt SF
  vt PF
Gm0077x00232 yg SF
  yg PF
jgi|Nemve1|241632|estExt_fgenesh1_pg.C_480076 External link nw SF
  nw PF