DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: HLH, helix-loop-helix DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
scaffold_39.9 External link nk SF
  nk PF
jgi|Monbr1|27791|fgenesh2_pg.scaffold_21000126 External link ov SF
  ov PF
CBP03015 External link cw SF
  cw PF
FBpp0239248 External link gw SF
  gw PF
AAEL001746-PA External link a4 SF
  a4 PF
AAEL001746-PA External link ax SF
  ax PF
jgi|Helro1|127280 External link hx SF
  hx PF
jgi|Sorbi1|5033791|Sb02g024460 External link oj SF
  oj PF
29814.m000735 External link rk SF
  rk PF
ENSOANP00000015850 External link o2 SF
  o2 PF
ENSCPOP00000006459 External link g2 SF
  g2 PF
ENSORLP00000019011 External link ol SF
  ol PF
ENSOANP00000023147 External link o2 SF
  o2 PF
ENSTRUP00000037229 External link to SF
  to PF
ENSETEP00000008901 External link ee SF
  ee PF
FOXG_15108 fo SF
  fo PF
ENSDARP00000094416 External link da SF
  da PF
ENSBTAP00000020864 External link bw SF
  bw PF
jgi|Phybl1|70626|fgeneshPB_pg.35__62 External link hn SF
  hn PF
ENSPTRP00000031710 External link xp SF
  xp PF
ENSRNOP00000040770 External link rn SF
  rn PF
ENSDARP00000050170 External link da SF
  da PF
jgi|Phybl1|60141|fgeneshPB_pg.2__861 External link hn SF
  hn PF
FOXG_03199 fo SF
  fo PF
jgi|Helro1|153169 External link hx SF
  hx PF
ENSMUSP00000039071 External link mh SF
Gene name: Mxd4  mh PF
jgi|Brafl1|112554|fgenesh2_pg.scaffold_1361000003 External link bf SF
  bf PF
FBpp0132884 External link ge SF
  ge PF
evm.TU.supercontig_124.41 r6 SF
  r6 PF
ENSOCUP00000013229 External link o3 SF
  o3 PF
ENSGACP00000024235 External link g1 SF
  g1 PF
FBpp0076296 External link de SF
  de PF
ENSPTRP00000036877 External link xq SF
  xq PF
ENSECAP00000009166 External link e5 SF
  e5 PF
FBpp0070555 External link dd SF
  dd PF
FBpp0134957 External link ge SF
  ge PF
ENSEEUP00000005347 External link ek SF
  ek PF
ENSDNOP00000001927 External link d5 SF
  d5 PF
AAEL004097-PA External link ax SF
  ax PF
ENSTRUP00000037919 External link to SF
  to PF
ENSTRUP00000007117 External link to SF
  to PF
ENSMODP00000008245 External link op SF
  op PF
ENSP00000357348 External link ht SF
  ht PF
ENSGALP00000013919 External link gg SF
  gg PF
ENSMMUP00000012417 External link r2 SF
  r2 PF
HCAG_07218.1 hk SF
  hk PF
BDEG_01719 b8 SF
  b8 PF
FBpp0173902 External link dx SF
  dx PF
ENSOANP00000002554 External link o2 SF
  o2 PF
jgi|Helro1|177333 External link hx SF
  hx PF