DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|15668955|ref|NP_247759.1| External link mj SF
  mj PF
gi|150399778|ref|YP_001323545.1| External link 57 SF
  57 PF
gi|45357596|ref|NP_987153.1| External link m2 SF
  m2 PF
gi|134046673|ref|YP_001098158.1| External link 0o SF
  0o PF
gi|150402954|ref|YP_001330248.1| External link 5j SF
  5j PF
gi|147921009|ref|YP_685181.1| External link 3n SF
  3n PF
gi|20090833|ref|NP_616908.1| External link ma SF
  ma PF No hits
gi|21228813|ref|NP_634735.1| External link mz SF
  mz PF No hits
gi|20091400|ref|NP_617475.1| External link ma SF
  ma PF No hits
gi|91773073|ref|YP_565765.1| External link m9 SF
  m9 PF No hits
gi|21229196|ref|NP_635118.1| External link mz SF
  mz PF No hits
gi|20091373|ref|NP_617448.1| External link ma SF
  ma PF No hits
gi|124485028|ref|YP_001029644.1| External link 4l SF
  4l PF
gi|158319700|ref|YP_001512207.1| External link 68 SF
  68 PF
gi|56965205|ref|YP_176937.1| External link x4 SF
  x4 PF
gi|116252878|ref|YP_768716.1| External link 17 SF
  17 PF
gi|167040072|ref|YP_001663057.1| External link 8d SF
  8d PF
gi|77461979|ref|YP_351483.1| External link rh SF
  rh PF
gi|167037404|ref|YP_001664982.1| External link 82 SF
  82 PF
gi|20808330|ref|NP_623501.1| External link tt SF
  tt PF
gi|134099466|ref|YP_001105127.1| External link 18 SF
  18 PF
gi|126460868|ref|YP_001041982.1| External link 21 SF
  21 PF
gi|160902423|ref|YP_001568004.1| External link 6y SF
  6y PF
gi|157364871|ref|YP_001471638.1| External link 5v SF
  5v PF
gi|55980986|ref|YP_144283.1| External link tr SF
  tr PF No hits
gi|146303615|ref|YP_001190931.1| External link 02 SF
  02 PF
gi|20094697|ref|NP_614544.1| External link mn SF
  mn PF No hits
gi|163849090|ref|YP_001637134.1| External link 6w SF
  6w PF
gi|86740930|ref|YP_481330.1| External link fk SF
  fk PF
CAWG_01625 iw SF
  iw PF
gi|116624269|ref|YP_826425.1| External link 25 SF
  25 PF
gi|124484895|ref|YP_001029511.1| External link 4l SF
  4l PF
gi|148265809|ref|YP_001232515.1| External link 3g SF
  3g PF
gi|145224071|ref|YP_001134749.1| External link 4h SF
  4h PF No hits
gi|72160971|ref|YP_288628.1| External link tf SF
  tf PF
gi|14590278|ref|NP_142344.1| External link ph SF
  ph PF No hits
gi|172056440|ref|YP_001812900.1| External link 7r SF
  7r PF
gi|159897931|ref|YP_001544178.1| External link 5u SF
  5u PF No hits
gi|110639187|ref|YP_679396.1| External link 37 SF
  37 PF No hits
gi|150401251|ref|YP_001325017.1| External link 4v SF
  4v PF No hits
gi|52142657|ref|YP_084172.1| External link x5 SF
  x5 PF No hits
gi|171185137|ref|YP_001794056.1| External link 8h SF
  8h PF No hits
gi|14521634|ref|NP_127110.1| External link pb SF
  pb PF
gi|20091696|ref|NP_617771.1| External link ma SF
  ma PF No hits
gi|56420532|ref|YP_147850.1| External link gk SF
  gk PF
gi|116620179|ref|YP_822335.1| External link 25 SF
  25 PF
gi|150392511|ref|YP_001315186.1| External link 1i SF
  1i PF
gi|116753769|ref|YP_842887.1| External link 11 SF
  11 PF
gi|49482293|ref|YP_039517.1| External link a0 SF
  a0 PF
gi|124027350|ref|YP_001012670.1| External link 5m SF
  5m PF No hits