DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
gi|120435775|ref|YP_861461.1| External link 1s SF
  1s PF
30229.m006314 External link rk SF
  rk PF
gi|21910733|ref|NP_665001.1| External link s7 SF
  s7 PF
gi|127514161|ref|YP_001095358.1| External link 1r SF
  1r PF
gi|46906432|ref|YP_012821.1| External link la SF
  la PF No hits
gi|19746785|ref|NP_607921.1| External link sx SF
  sx PF
gi|83589675|ref|YP_429684.1| External link m8 SF
  m8 PF
gi|22299193|ref|NP_682440.1| External link th SF
  th PF
gi|52080456|ref|YP_079247.1| External link lf SF
  lf PF
gi|148559747|ref|YP_001258638.1| External link 1k SF
  1k PF
gi|15675678|ref|NP_269852.1| External link x2 SF
  x2 PF
gi|148238655|ref|YP_001224042.1| External link 29 SF
  29 PF
gi|83269793|ref|YP_419084.1| External link by SF
  by PF
gi|37522854|ref|NP_926231.1| External link gv SF
  gv PF
gi|52785834|ref|YP_091663.1| External link lc SF
  lc PF
gi|146276584|ref|YP_001166743.1| External link 3k SF
  3k PF
gi|17987577|ref|NP_540211.1| External link bm SF
  bm PF
gi|53715989|ref|YP_104888.1| External link bi SF
  bi PF
gi|153937427|ref|YP_001386879.1| External link 2u SF
  2u PF
gi|153949511|ref|YP_001400808.1| External link 06 SF
  06 PF
gi|172062188|ref|YP_001809839.1| External link 85 SF
  85 PF
gi|126447755|ref|YP_001077396.1| External link 1y SF
  1y PF
gi|163841525|ref|YP_001625930.1| External link 7f SF
  7f PF
gi|170759264|ref|YP_001786239.1| External link 8s SF
  8s PF
gi|20809102|ref|NP_624273.1| External link tt SF
  tt PF
gi|56419303|ref|YP_146621.1| External link gk SF
  gk PF
gi|81429393|ref|YP_396394.1| External link ls SF
  ls PF
gi|138894329|ref|YP_001124782.1| External link 1u SF
  1u PF
gi|117929202|ref|YP_873753.1| External link 3q SF
  3q PF
gi|90425530|ref|YP_533900.1| External link rg SF
  rg PF
gi|161501943|ref|NP_455844.2| External link si SF
  si PF
gi|94990800|ref|YP_598900.1| External link ts SF
  ts PF
ENSXETP00000014643 External link xk SF
  xk PF
gi|170081013|ref|YP_001730333.1| External link 8n SF
  8n PF
gi|91781918|ref|YP_557124.1| External link b4 SF
  b4 PF
gi|116696010|ref|YP_841586.1| External link 2j SF
  2j PF
gi|121597721|ref|YP_990931.1| External link 1m SF
  1m PF
gi|194099403|ref|YP_002002504.1| External link 9f SF
  9f PF
gi|116253132|ref|YP_768970.1| External link 17 SF
  17 PF
gi|108804074|ref|YP_644011.1| External link rw SF
  rw PF
gi|17989331|ref|NP_541964.1| External link bm SF
  bm PF
gi|39546323|ref|NP_460619.2| External link su SF
Gene name: fnr  su PF
gi|108804896|ref|YP_644833.1| External link rw SF
  rw PF
gi|82702896|ref|YP_412462.1| External link nl SF
  nl PF
gi|71903876|ref|YP_280679.1| External link zy SF
  zy PF
gi|107027458|ref|YP_624969.1| External link b6 SF
  b6 PF
gi|165976066|ref|YP_001651659.1| External link 7y SF
  7y PF
gi|94995030|ref|YP_603128.1| External link tg SF
  tg PF
gi|170744186|ref|YP_001772841.1| External link 7s SF
  7s PF
gi|116671937|ref|YP_832870.1| External link 1f SF
  1f PF