DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|54027571|ref|YP_121813.1| External link nf SF
  nf PF No hits
gi|62390125|ref|YP_225527.1| External link cb SF
  cb PF No hits
gi|145295377|ref|YP_001138198.1| External link 4e SF
  4e PF No hits
gi|111019391|ref|YP_702363.1| External link 3r SF
  3r PF No hits
gi|19552459|ref|NP_600461.1| External link c3 SF
  c3 PF No hits
gi|23100880|ref|NP_694347.1| External link oi SF
  oi PF
gi|150009527|ref|YP_001304270.1| External link 0g SF
  0g PF
gi|88602627|ref|YP_502805.1| External link m6 SF
  m6 PF
gi|148658078|ref|YP_001278283.1| External link 4a SF
  4a PF
gi|146298695|ref|YP_001193286.1| External link 1z SF
  1z PF
gi|70605960|ref|YP_254830.1| External link za SF
  za PF
gi|108803498|ref|YP_643435.1| External link rw SF
  rw PF
gi|191637654|ref|YP_001986820.1| External link 95 SF
  95 PF
gi|157363750|ref|YP_001470517.1| External link 5v SF
  5v PF
gi|76802994|ref|YP_331089.1| External link np SF
  np PF
gi|81427994|ref|YP_394993.1| External link ls SF
  ls PF
gi|16081924|ref|NP_394331.1| External link ta SF
  ta PF
gi|184156019|ref|YP_001844359.1| External link 9b SF
  9b PF
gi|73668133|ref|YP_304148.1| External link fu SF
  fu PF
gi|110638423|ref|YP_678632.1| External link 37 SF
  37 PF
gi|46198706|ref|YP_004373.1| External link t0 SF
  t0 PF
gi|156743261|ref|YP_001433390.1| External link 77 SF
  77 PF
gi|150393141|ref|YP_001315816.1| External link 1i SF
  1i PF
gi|161508896|ref|YP_001574555.1| External link 6o SF
  6o PF
gi|148544718|ref|YP_001272088.1| External link 49 SF
  49 PF
gi|118465260|ref|YP_882856.1| External link 59 SF
  59 PF
gi|15678242|ref|NP_275357.1| External link md SF
  md PF
gi|91773812|ref|YP_566504.1| External link m9 SF
  m9 PF
gi|49482862|ref|YP_040086.1| External link a0 SF
  a0 PF
gi|15807523|ref|NP_296259.1| External link dr SF
  dr PF
gi|120437529|ref|YP_863215.1| External link 1s SF
  1s PF
gi|57233538|ref|YP_180848.1| External link et SF
  et PF
gi|57651475|ref|YP_185573.1| External link x8 SF
  x8 PF
gi|148267093|ref|YP_001246036.1| External link 2c SF
  2c PF
gi|82750337|ref|YP_416078.1| External link sk SF
  sk PF
gi|15926311|ref|NP_373844.1| External link s2 SF
  s2 PF
gi|116494321|ref|YP_806055.1| External link 1o SF
  1o PF
gi|189219038|ref|YP_001939679.1| External link 9h SF
  9h PF
gi|150024191|ref|YP_001295017.1| External link 5d SF
  5d PF
gi|94986367|ref|YP_605731.1| External link d4 SF
  d4 PF
gi|87161674|ref|YP_493324.1| External link a2 SF
  a2 PF
gi|110667522|ref|YP_657333.1| External link 1w SF
  1w PF
gi|13541769|ref|NP_111457.1| External link tv SF
  tv PF
gi|88194405|ref|YP_499198.1| External link aq SF
  aq PF
gi|49485506|ref|YP_042727.1| External link ar SF
  ar PF
gi|159900544|ref|YP_001546791.1| External link 5u SF
  5u PF
gi|163845699|ref|YP_001633743.1| External link 6w SF
  6w PF
gi|255531457|ref|YP_003091829.1| External link p5 SF
  p5 PF
gi|21282325|ref|NP_645413.1| External link s1 SF
  s1 PF
gi|156978962|ref|YP_001441221.1| External link 71 SF
  71 PF