DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: C-terminal effector domain of the bipartite response regulators.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|134093316|ref|YP_001098391.1| External link 5e SF
  5e PF
gi|16120787|ref|NP_404100.1| External link yp SF
  yp PF
gi|77920060|ref|YP_357875.1| External link p8 SF
  p8 PF
gi|161526055|ref|YP_001581067.1| External link 76 SF
  76 PF
gi|126449935|ref|YP_001081118.1| External link 1y SF
  1y PF
gi|148263402|ref|YP_001230108.1| External link 3g SF
  3g PF
gi|153950414|ref|YP_001399859.1| External link 06 SF
  06 PF
gi|90423380|ref|YP_531750.1| External link rg SF
  rg PF
gi|16124086|ref|NP_407399.1| External link yp SF
  yp PF
gi|153953680|ref|YP_001394445.1| External link 16 SF
  16 PF
gi|58040033|ref|YP_191997.1| External link ox SF
  ox PF
gi|170022392|ref|YP_001718897.1| External link 8r SF
  8r PF
gi|117618149|ref|YP_857530.1| External link 33 SF
  33 PF
gi|119774853|ref|YP_927593.1| External link 2p SF
  2p PF
jgi|Poptr1_1|586528|eugene3.197090001 External link pt SF
  pt PF
gi|156977967|ref|YP_001448873.1| External link 65 SF
  65 PF
gi|126461725|ref|YP_001042839.1| External link 21 SF
  21 PF
34537.m000024 External link rk SF
  rk PF
gi|15603241|ref|NP_246315.1| External link pm SF
  pm PF
gi|189424148|ref|YP_001951325.1| External link 9z SF
  9z PF
gi|118477352|ref|YP_894503.1| External link 31 SF
  31 PF
gi|78065828|ref|YP_368597.1| External link bk SF
  bk PF
gi|170737706|ref|YP_001778966.1| External link 7j SF
  7j PF
gi|170731837|ref|YP_001763784.1| External link 7j SF
  7j PF
gi|53725149|ref|YP_102516.1| External link bi SF
  bi PF
gi|171060433|ref|YP_001792782.1| External link 7i SF
  7i PF
gi|148555062|ref|YP_001262644.1| External link 2i SF
  2i PF
gi|152997395|ref|YP_001342230.1| External link 0z SF
  0z PF
gi|82777077|ref|YP_403426.1| External link d1 SF
  d1 PF
gi|26987013|ref|NP_742438.1| External link ps SF
  ps PF
gi|119946428|ref|YP_944108.1| External link 0x SF
  0x PF
gi|56479939|ref|NP_707505.2| External link s0 SF
  s0 PF
gi|154250536|ref|YP_001411360.1| External link 1e SF
  1e PF
gi|37526668|ref|NP_930012.1| External link pd SF
  pd PF
gi|71905866|ref|YP_283453.1| External link dj SF
  dj PF
gi|90426125|ref|YP_534495.1| External link rg SF
  rg PF
gi|145597926|ref|YP_001162002.1| External link 5h SF
  5h PF
gi|154706185|ref|YP_001425412.1| External link 2n SF
  2n PF
gi|145300860|ref|YP_001143701.1| External link 44 SF
  44 PF
gi|148543652|ref|YP_001271022.1| External link 49 SF
  49 PF
gi|170717345|ref|YP_001784454.1| External link 7p SF
  7p PF
gi|165975506|ref|YP_001651099.1| External link 7y SF
  7y PF
gi|160895777|ref|YP_001561359.1| External link 7d SF
  7d PF
gi|148254647|ref|YP_001239232.1| External link 42 SF
  42 PF
gi|116688536|ref|YP_834159.1| External link 5l SF
  5l PF
gi|54307452|ref|YP_128472.1| External link he SF
  he PF
gi|52078744|ref|YP_077535.1| External link lf SF
  lf PF
gi|51598091|ref|YP_072282.1| External link yr SF
  yr PF
gi|126463506|ref|YP_001044620.1| External link 21 SF
  21 PF
gi|152981322|ref|YP_001355016.1| External link 4d SF
  4d PF