DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: C-terminal effector domain of the bipartite response regulators.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|116626537|ref|YP_828693.1| External link 25 SF
  25 PF
gi|57866119|ref|YP_187770.1| External link ep SF
  ep PF
gi|148544115|ref|YP_001271485.1| External link 49 SF
  49 PF
gi|150015027|ref|YP_001307281.1| External link 03 SF
  03 PF
gi|167039504|ref|YP_001662489.1| External link 8d SF
  8d PF
gi|57867230|ref|YP_188905.1| External link ep SF
  ep PF
gi|86742210|ref|YP_482610.1| External link fk SF
  fk PF
gi|15896400|ref|NP_349749.1| External link ca SF
  ca PF
gi|167036784|ref|YP_001664362.1| External link 82 SF
  82 PF
gi|110802727|ref|YP_699680.1| External link 5n SF
  5n PF
gi|18311404|ref|NP_563338.1| External link cu SF
  cu PF
gi|20808677|ref|NP_623848.1| External link tt SF
  tt PF
gi|187933087|ref|YP_001884458.1| External link 97 SF
  97 PF
gi|160881445|ref|YP_001560413.1| External link 5z SF
  5z PF
gi|153952844|ref|YP_001393609.1| External link 16 SF
  16 PF
gi|27467214|ref|NP_763851.1| External link s3 SF
  s3 PF
gi|19704850|ref|NP_602345.1| External link fn SF
  fn PF
gi|160901830|ref|YP_001567411.1| External link 6y SF
  6y PF
gi|126697623|ref|YP_001086520.1| External link 3x SF
  3x PF
gi|150392177|ref|YP_001322226.1| External link 0n SF
  0n PF
gi|73662295|ref|YP_301076.1| External link zt SF
  zt PF
gi|27468364|ref|NP_765001.1| External link s3 SF
  s3 PF
gi|110798736|ref|YP_697111.1| External link 2f SF
  2f PF
gi|150008947|ref|YP_001303690.1| External link 0g SF
  0g PF No hits
29175.m000097 External link rk SF
  rk PF
gi|150395665|ref|YP_001326132.1| External link 2m SF
  2m PF
gi|182679885|ref|YP_001834031.1| External link 8q SF
  8q PF
gi|171057563|ref|YP_001789912.1| External link 7i SF
  7i PF
gi|103488004|ref|YP_617565.1| External link ak SF
  ak PF
gi|117624058|ref|YP_852971.1| External link 1j SF
  1j PF
gi|37528381|ref|NP_931726.1| External link pd SF
  pd PF
gi|104781941|ref|YP_608439.1| External link pq SF
  pq PF
gi|116250469|ref|YP_766307.1| External link 17 SF
  17 PF
gi|15964582|ref|NP_384935.1| External link sm SF
  sm PF
gi|50084356|ref|YP_045866.1| External link ab SF
  ab PF
gi|145599154|ref|YP_001163230.1| External link 5h SF
  5h PF
gi|15964581|ref|NP_384934.1| External link sm SF
  sm PF
gi|82699104|ref|YP_413678.1| External link by SF
  by PF
gi|115358980|ref|YP_776118.1| External link 0u SF
  0u PF
gi|83716740|ref|YP_439002.1| External link b5 SF
  b5 PF
gi|116692818|ref|YP_838351.1| External link 5l SF
  5l PF
gi|126462526|ref|YP_001043640.1| External link 21 SF
  21 PF
gi|62289164|ref|YP_220957.1| External link b3 SF
  b3 PF
gi|28871016|ref|NP_793635.1| External link pj SF
  pj PF
gi|86356800|ref|YP_468692.1| External link rz SF
  rz PF
gi|126462525|ref|YP_001043639.1| External link 21 SF
  21 PF
gi|58580891|ref|YP_199907.1| External link xo SF
  xo PF
gi|126464170|ref|YP_001045283.1| External link 21 SF
  21 PF
gi|116253270|ref|YP_769108.1| External link 17 SF
  17 PF
gi|170737931|ref|YP_001779191.1| External link 7j SF
  7j PF