DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|154685014|ref|YP_001420175.1| External link 2o SF
  2o PF
gi|42522964|ref|NP_968344.1| External link bd SF
  bd PF
gi|16081898|ref|NP_394302.1| External link ta SF
  ta PF
gi|49484989|ref|YP_042210.1| External link ar SF
  ar PF
gi|82749826|ref|YP_415567.1| External link sk SF
  sk PF
gi|87161448|ref|YP_492831.1| External link a2 SF
  a2 PF
gi|148266539|ref|YP_001245482.1| External link 2c SF
  2c PF
gi|15925816|ref|NP_373349.1| External link s2 SF
  s2 PF
gi|88193886|ref|YP_498671.1| External link aq SF
  aq PF
gi|15923102|ref|NP_370636.1| External link sa SF
  sa PF
gi|21281814|ref|NP_644900.1| External link s1 SF
  s1 PF
gi|151220268|ref|YP_001331091.1| External link 5p SF
  5p PF
gi|156978442|ref|YP_001440701.1| External link 71 SF
  71 PF
gi|57652459|ref|YP_185000.1| External link x8 SF
  x8 PF
gi|150392577|ref|YP_001315252.1| External link 1i SF
  1i PF
gi|49482355|ref|YP_039579.1| External link a0 SF
  a0 PF
gi|161508380|ref|YP_001574039.1| External link 6o SF
  6o PF
gi|27375847|ref|NP_767376.1| External link bj SF
  bj PF
gi|27381997|ref|NP_773526.1| External link bj SF
  bj PF
gi|33860921|ref|NP_892482.1| External link p2 SF
  p2 PF
gi|81427788|ref|YP_394787.1| External link ls SF
  ls PF
gi|13471492|ref|NP_103058.1| External link mk SF
  mk PF
gi|172063449|ref|YP_001811100.1| External link 85 SF
  85 PF
gi|54022168|ref|YP_116410.1| External link nf SF
  nf PF
gi|116619083|ref|YP_819454.1| External link 2s SF
  2s PF
gi|115358716|ref|YP_775854.1| External link 0u SF
  0u PF
gi|116334455|ref|YP_795982.1| External link 52 SF
  52 PF
gi|116618054|ref|YP_818425.1| External link 2s SF
  2s PF
gi|123966817|ref|YP_001011898.1| External link 0y SF
  0y PF
gi|182412753|ref|YP_001817819.1| External link 8i SF
  8i PF
gi|186473019|ref|YP_001860361.1| External link 90 SF
  90 PF
gi|89902890|ref|YP_525361.1| External link rx SF
  rx PF
gi|163854612|ref|YP_001628910.1| External link 5y SF
  5y PF
gi|27381954|ref|NP_773483.1| External link bj SF
  bj PF
gi|73661480|ref|YP_300261.1| External link zt SF
  zt PF No hits
gi|125624426|ref|YP_001032909.1| External link 39 SF
  39 PF
gi|170724913|ref|YP_001758939.1| External link 88 SF
  88 PF
gi|170016487|ref|YP_001727406.1| External link 7x SF
  7x PF
gi|124383027|ref|YP_001024260.1| External link 38 SF
  38 PF
gi|53717050|ref|YP_105845.1| External link bi SF
  bi PF
gi|152982060|ref|YP_001353624.1| External link 4d SF
  4d PF
gi|91974804|ref|YP_567463.1| External link rr SF
  rr PF
gi|83716995|ref|YP_439592.1| External link b5 SF
  b5 PF
gi|29827872|ref|NP_822506.1| External link s9 SF
  s9 PF
gi|91781916|ref|YP_557122.1| External link b4 SF
  b4 PF
gi|78062153|ref|YP_372061.1| External link bk SF
  bk PF
gi|73661582|ref|YP_300363.1| External link zt SF
  zt PF
gi|56552164|ref|YP_163003.1| External link zm SF
  zm PF No hits
gi|114570067|ref|YP_756747.1| External link 2x SF
  2x PF No hits
gi|86738928|ref|YP_479328.1| External link fk SF
  fk PF