DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|108807444|ref|YP_651360.1| External link ys SF
  ys PF
gi|15641161|ref|NP_230793.1| External link vc SF
  vc PF
gi|153000653|ref|YP_001366334.1| External link 1a SF
  1a PF
gi|146292963|ref|YP_001183387.1| External link 2a SF
  2a PF
gi|186895416|ref|YP_001872528.1| External link 9g SF
  9g PF
gi|126174458|ref|YP_001050607.1| External link 2z SF
  2z PF
gi|114047424|ref|YP_737974.1| External link 24 SF
  24 PF
gi|146312068|ref|YP_001177142.1| External link 08 SF
  08 PF
gi|59711498|ref|YP_204274.1| External link vf SF
  vf PF
gi|28898010|ref|NP_797615.1| External link vp SF
  vp PF
gi|37679625|ref|NP_934234.1| External link vb SF
  vb PF
gi|114563062|ref|YP_750575.1| External link 3w SF
  3w PF
gi|145598352|ref|YP_001162428.1| External link 5h SF
  5h PF
gi|153950876|ref|YP_001400996.1| External link 06 SF
  06 PF
gi|160875287|ref|YP_001554603.1| External link 7a SF
  7a PF
gi|162420061|ref|YP_001606836.1| External link 6m SF
  6m PF
gi|145298331|ref|YP_001141172.1| External link 44 SF
  44 PF
gi|54309595|ref|YP_130615.1| External link he SF
  he PF
gi|170726886|ref|YP_001760912.1| External link 88 SF
  88 PF
gi|127512977|ref|YP_001094174.1| External link 1r SF
  1r PF
gi|108811705|ref|YP_647472.1| External link yn SF
  yn PF
gi|167623878|ref|YP_001674172.1| External link 8l SF
  8l PF
gi|156974914|ref|YP_001445821.1| External link 65 SF
  65 PF
gi|120598951|ref|YP_963525.1| External link 4g SF
  4g PF
gi|16122304|ref|NP_405617.1| External link yp SF
  yp PF
gi|157375206|ref|YP_001473806.1| External link 6d SF
  6d PF
gi|71279189|ref|YP_269000.1| External link lw SF
  lw PF
gi|109897294|ref|YP_660549.1| External link px SF
  px PF
gi|27366107|ref|NP_761635.1| External link vv SF
  vv PF
gi|24374034|ref|NP_718077.1| External link sl SF
  sl PF
gi|113970384|ref|YP_734177.1| External link 0f SF
  0f PF
gi|161484797|ref|NP_669554.2| External link yk SF
  yk PF
gi|117621239|ref|YP_855889.1| External link 33 SF
  33 PF
gi|123442626|ref|YP_001006603.1| External link 1g SF
  1g PF
gi|85059247|ref|YP_454949.1| External link og SF
  og PF
gi|50121405|ref|YP_050572.1| External link er SF
  er PF
gi|156933568|ref|YP_001437484.1| External link 69 SF
  69 PF
gi|119946016|ref|YP_943696.1| External link 0x SF
  0x PF
gi|91793434|ref|YP_563085.1| External link hw SF
  hw PF
gi|51596374|ref|YP_070565.1| External link yr SF
  yr PF
gi|152970915|ref|YP_001336024.1| External link 2k SF
  2k PF
gi|157371009|ref|YP_001478998.1| External link 7e SF
  7e PF
gi|117920596|ref|YP_869788.1| External link 41 SF
  41 PF
gi|147674605|ref|YP_001216668.1| External link 15 SF
  15 PF
gi|45441710|ref|NP_993249.1| External link ye SF
  ye PF
gi|170024369|ref|YP_001720874.1| External link 8r SF
  8r PF
gi|157962157|ref|YP_001502191.1| External link 6t SF
  6t PF
gi|119774948|ref|YP_927688.1| External link 2p SF
  2p PF
6626 gf SF
  gf PF
gi|125975540|ref|YP_001039450.1| External link 4x SF
  4x PF No hits