DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Ribbon-helix-helix.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
jgi|Triad1|62510|fgeneshTA2_pg.C_scaffold_92000002 External link rq SF
  rq PF
CA2774|CaTFC4 External link al SF
  al PF
CAWG_02603 iw SF
  iw PF
gi|186682458|ref|YP_001865654.1| External link 9j SF
  9j PF No hits
gi|91780250|ref|YP_555457.1| External link b4 SF
  b4 PF
gi|37520414|ref|NP_923791.1| External link gv SF
  gv PF
gi|154244659|ref|YP_001415617.1| External link 2d SF
  2d PF No hits
gi|120609385|ref|YP_969063.1| External link 4t SF
  4t PF No hits
gi|157370623|ref|YP_001478612.1| External link 7e SF
  7e PF
gi|121634721|ref|YP_974966.1| External link 19 SF
  19 PF No hits
gi|92116192|ref|YP_575921.1| External link nb SF
  nb PF No hits
gi|53722180|ref|YP_111165.1| External link pe SF
  pe PF
gi|75908412|ref|YP_322708.1| External link va SF
  va PF No hits
gi|186681023|ref|YP_001864219.1| External link 9j SF
  9j PF
gi|31793786|ref|NP_856279.1| External link mc SF
  mc PF No hits
gi|172065540|ref|YP_001816252.1| External link 85 SF
  85 PF
gi|91786811|ref|YP_547763.1| External link p6 SF
  p6 PF No hits
gi|107022825|ref|YP_621152.1| External link b6 SF
  b6 PF
gi|27375160|ref|NP_766689.1| External link bj SF
  bj PF No hits
gi|167647780|ref|YP_001685443.1| External link 7o SF
  7o PF No hits
gi|92113560|ref|YP_573488.1| External link c8 SF
  c8 PF No hits
gi|39996818|ref|NP_952769.1| External link gs SF
  gs PF No hits
gi|172065627|ref|YP_001816339.1| External link 85 SF
  85 PF No hits
gi|94313587|ref|YP_586796.1| External link r4 SF
  r4 PF
gi|124026322|ref|YP_001015438.1| External link 3d SF
  3d PF
gi|161525501|ref|YP_001580513.1| External link 76 SF
  76 PF No hits
gi|163868767|ref|YP_001609991.1| External link 6u SF
  6u PF No hits
gi|154246942|ref|YP_001417900.1| External link 2d SF
  2d PF No hits
gi|115361293|ref|YP_778430.1| External link 0u SF
  0u PF
gi|121638488|ref|YP_978712.1| External link 07 SF
  07 PF No hits
gi|113868178|ref|YP_726667.1| External link 2j SF
  2j PF
gi|71906212|ref|YP_283799.1| External link dj SF
  dj PF
gi|78060178|ref|YP_366753.1| External link bk SF
  bk PF
gi|92119296|ref|YP_579025.1| External link nb SF
  nb PF No hits
gi|91792590|ref|YP_562241.1| External link hw SF
  hw PF No hits
gi|15921628|ref|NP_377297.1| External link sv SF
  sv PF
gi|186682936|ref|YP_001866132.1| External link 9j SF
  9j PF No hits
gi|120556378|ref|YP_960729.1| External link 1n SF
  1n PF No hits
gi|91786817|ref|YP_547769.1| External link p6 SF
  p6 PF
gi|76802948|ref|YP_331043.1| External link np SF
  np PF
gi|73539523|ref|YP_299890.1| External link rl SF
  rl PF
gi|126445378|ref|YP_001062619.1| External link 36 SF
  36 PF
gi|154251656|ref|YP_001412480.1| External link 1e SF
  1e PF No hits
gi|189439248|ref|YP_001954329.1| External link e6 SF
  e6 PF No hits
gi|150007379|ref|YP_001302122.1| External link 0g SF
  0g PF No hits
gi|186682105|ref|YP_001865301.1| External link 9j SF
  9j PF
gi|158425456|ref|YP_001526748.1| External link 75 SF
  75 PF No hits
gi|116696172|ref|YP_841748.1| External link 2j SF
  2j PF
gi|87201076|ref|YP_498333.1| External link nv SF
  nv PF No hits
gi|154253964|ref|YP_001414788.1| External link 1e SF
  1e PF No hits