DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Homeodomain-like.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
128276 External link sj SF
  sj PF
gi|156541132|ref|XP_001599246.1| External link nz SF
  nz PF
gi|19554136|ref|NP_602138.1| External link c3 SF
  c3 PF No hits
gi|62391791|ref|YP_227193.1| External link cb SF
  cb PF No hits
gi|94971279|ref|YP_593327.1| External link a3 SF
  a3 PF
gi|94971289|ref|YP_593337.1| External link a3 SF
  a3 PF
gi|53711806|ref|YP_097798.1| External link fa SF
  fa PF No hits
gi|118496628|ref|YP_897678.1| External link 0b SF
  0b PF No hits
PITG_06075 iy SF
  iy PF
Bmb010376 External link om SF
  om PF
Bmb034064 External link om SF
  om PF
gi|85858364|ref|YP_460566.1| External link yt SF
  yt PF
GLEAN_01736 External link tj SF
  tj PF
jgi|Capca1|228216|estExt_fgenesh1_pg.C_3650019 External link i1 SF
  i1 PF
RO3G_05640.1 ry SF
  ry PF
Bmb009410 External link om SF
  om PF
gi|161525633|ref|YP_001580645.1| External link 76 SF
  76 PF
RO3G_01430.1 ry SF
  ry PF
Bmb020563 External link om SF
  om PF
AN0344.2 an SF
  an PF
GLEAN_01672 External link tj SF
  tj PF
gi|16332278|ref|NP_443006.1| External link cs SF
  cs PF
gi|16330163|ref|NP_440891.1| External link cs SF
  cs PF
gi|16331436|ref|NP_442164.1| External link cs SF
  cs PF
gi|16330637|ref|NP_441365.1| External link cs SF
  cs PF
gi|16331943|ref|NP_442671.1| External link cs SF
  cs PF
gi|16329519|ref|NP_440247.1| External link cs SF
  cs PF
gi|16329212|ref|NP_439940.1| External link cs SF
  cs PF
gi|75908405|ref|YP_322701.1| External link va SF
  va PF
gi|70726761|ref|YP_253675.1| External link zh SF
  zh PF
gi|75907373|ref|YP_321669.1| External link va SF
  va PF
gi|49483989|ref|YP_041213.1| External link a0 SF
  a0 PF
gi|70727607|ref|YP_254523.1| External link zh SF
  zh PF
gi|188996168|ref|YP_001930419.1| External link 96 SF
  96 PF
gi|17231122|ref|NP_487670.1| External link no SF
  no PF
gi|167623810|ref|YP_001674104.1| External link 8l SF
  8l PF
gi|167624532|ref|YP_001674826.1| External link 8l SF
  8l PF
gi|167623124|ref|YP_001673418.1| External link 8l SF
  8l PF
gi|190150281|ref|YP_001968806.1| External link d9 SF
  d9 PF
gi|156974005|ref|YP_001444912.1| External link 65 SF
  65 PF No hits
gi|33591505|ref|NP_879149.1| External link be SF
  be PF
gi|33593146|ref|NP_880790.1| External link be SF
  be PF
gi|194334893|ref|YP_002016753.1| External link ed SF
  ed PF
gi|78355792|ref|YP_387241.1| External link ds SF
  ds PF
gi|108798481|ref|YP_638678.1| External link yb SF
  yb PF
gi|54024854|ref|YP_119096.1| External link nf SF
  nf PF
gi|190575783|ref|YP_001973628.1| External link 9i SF
  9i PF
gi|33592448|ref|NP_880092.1| External link be SF
  be PF
gi|42527972|ref|NP_973070.1| External link td SF
  td PF
gi|91790169|ref|YP_551121.1| External link p6 SF
  p6 PF