DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: lambda repressor-like DNA-binding domains.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|117929253|ref|YP_873804.1| External link 3q SF
  3q PF
gi|152970300|ref|YP_001335409.1| External link 2k SF
  2k PF
gi|46906780|ref|YP_013169.1| External link la SF
  la PF
ENSXETP00000053247 External link xn SF
  xn PF
gi|54309289|ref|YP_130309.1| External link he SF
  he PF
gi|52424203|ref|YP_087340.1| External link m3 SF
  m3 PF
gi|194451665|ref|YP_002048504.1| External link 9r SF
  9r PF
gi|116629951|ref|YP_815123.1| External link 13 SF
  13 PF
gi|46907957|ref|YP_014346.1| External link la SF
  la PF
gi|91783812|ref|YP_559018.1| External link b4 SF
  b4 PF
gi|13472675|ref|NP_104242.1| External link mk SF
  mk PF
gi|29144760|ref|NP_808102.1| External link es SF
  es PF
gi|15602412|ref|NP_245484.1| External link pm SF
  pm PF
gi|68249775|ref|YP_248887.1| External link hf SF
  hf PF
gi|116252096|ref|YP_767934.1| External link 17 SF
  17 PF
gi|87200458|ref|YP_497715.1| External link nv SF
  nv PF
gi|16800905|ref|NP_471173.1| External link li SF
  li PF
gi|182413203|ref|YP_001818269.1| External link 8i SF
  8i PF
gi|190150145|ref|YP_001968670.1| External link d9 SF
  d9 PF
gi|55823314|ref|YP_141755.1| External link x1 SF
  x1 PF
gi|145298945|ref|YP_001141786.1| External link 44 SF
  44 PF
gi|150018697|ref|YP_001310951.1| External link 03 SF
  03 PF
gi|182414717|ref|YP_001819783.1| External link 8i SF
  8i PF
gi|16763281|ref|NP_458898.1| External link ty SF
  ty PF
gi|111022233|ref|YP_705205.1| External link 3r SF
  3r PF
gi|170024101|ref|YP_001720606.1| External link 8r SF
  8r PF
gi|56963337|ref|YP_175068.1| External link x4 SF
  x4 PF
ENSAPMP00000033792 External link ai SF
  ai PF
gi|148828376|ref|YP_001293129.1| External link 4p SF
  4p PF
gi|162419802|ref|YP_001606983.1| External link 6m SF
  6m PF
gi|59713531|ref|YP_206306.1| External link vf SF
  vf PF
gi|186895680|ref|YP_001872792.1| External link 9g SF
  9g PF
gi|154250275|ref|YP_001411100.1| External link 3l SF
  3l PF
gi|148826160|ref|YP_001290913.1| External link 4f SF
  4f PF
gi|147673764|ref|YP_001217268.1| External link 15 SF
  15 PF
gi|116490854|ref|YP_810398.1| External link 4m SF
  4m PF
gi|165976235|ref|YP_001651828.1| External link 7y SF
  7y PF
gi|37678241|ref|NP_932850.1| External link vb SF
  vb PF
gi|15641725|ref|NP_231357.1| External link vc SF
  vc PF
gi|172057671|ref|YP_001814131.1| External link 7r SF
  7r PF
gi|16767726|ref|NP_463341.1| External link su SF
Gene name: idnR  su PF
gi|116495561|ref|YP_807295.1| External link 1o SF
  1o PF
gi|154250234|ref|YP_001411059.1| External link 3l SF
  3l PF
gi|54303230|ref|YP_133223.1| External link he SF
  he PF
ENSAPMP00000017559 External link ai SF
  ai PF
gi|110801509|ref|YP_699750.1| External link 5n SF
  5n PF
gi|86357685|ref|YP_469577.1| External link rz SF
  rz PF
ENSAPMP00000033792 External link aj SF
  aj PF
gi|145598063|ref|YP_001162139.1| External link 5h SF
  5h PF
gi|171059959|ref|YP_001792308.1| External link 7i SF
  7i PF