DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


Details Genome DB Domain architecture
gi|115945882|ref|XP_001186453.1| External link tu SF
  tu PF
gi|115843102|ref|XP_790907.2| External link tu SF
  tu PF
ENSORLP00000019754 External link o1 SF
  o1 PF
ENSTRUP00000028852 External link to SF
  to PF
ENSTRUP00000029747 External link to SF
  to PF
ENSGACP00000026277 External link gc SF
  gc PF
ENSMMUP00000012934 External link ru SF
  ru PF
ENSTRUP00000029748 External link tq SF
  tq PF
jgi|Brafl1|87945|fgenesh2_pg.scaffold_167000085 External link bf SF
  bf PF
ENSTRUP00000029748 External link to SF
  to PF
ENSGACP00000026277 External link g1 SF
  g1 PF
ENSOGAP00000011132 External link ob SF
  ob PF
ENSOGAP00000011132 External link o4 SF
  o4 PF
ENSTRUP00000028852 External link tq SF
  tq PF
ENSORLP00000019755 External link ol SF
  ol PF
ENSETEP00000007639 External link e3 SF
  e3 PF
ENSETEP00000007639 External link ee SF
  ee PF
ENSMMUP00000012934 External link r2 SF
  r2 PF
ENSORLP00000019755 External link o1 SF
  o1 PF
ENSORLP00000019754 External link ol SF
  ol PF