DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Putative DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|153955054|ref|YP_001395819.1| External link 16 SF
  16 PF
gi|49481030|ref|YP_038987.1| External link ko SF
  ko PF
gi|89896206|ref|YP_519693.1| External link d2 SF
  d2 PF
gi|162456943|ref|YP_001619310.1| External link 60 SF
  60 PF
gi|54024907|ref|YP_119149.1| External link nf SF
  nf PF
gi|52078757|ref|YP_077548.1| External link lf SF
  lf PF
gi|52784127|ref|YP_089956.1| External link lc SF
  lc PF
gi|145220753|ref|YP_001131431.1| External link 4h SF
  4h PF
gi|68536504|ref|YP_251209.1| External link jk SF
  jk PF
gi|134103663|ref|YP_001109324.1| External link 18 SF
  18 PF
gi|24378676|ref|NP_720631.1| External link s6 SF
  s6 PF
gi|27467300|ref|NP_763937.1| External link s3 SF
  s3 PF
gi|116671285|ref|YP_832218.1| External link 1f SF
  1f PF
gi|47530507|ref|YP_021856.1| External link b2 SF
  b2 PF
gi|89894421|ref|YP_517908.1| External link d2 SF
  d2 PF
gi|16124947|ref|NP_419511.1| External link cc SF
  cc PF
gi|56965733|ref|YP_177467.1| External link x4 SF
  x4 PF
gi|57866244|ref|YP_187860.1| External link ep SF
  ep PF
gi|52140564|ref|YP_086265.1| External link x5 SF
  x5 PF
gi|170016675|ref|YP_001727594.1| External link 7x SF
  7x PF
gi|169829715|ref|YP_001699873.1| External link 7z SF
  7z PF
gi|81429478|ref|YP_396479.1| External link ls SF
  ls PF
gi|152966146|ref|YP_001361930.1| External link 58 SF
  58 PF
gi|42784150|ref|NP_981397.1| External link bx SF
  bx PF
gi|52841840|ref|YP_095639.1| External link x7 SF
  x7 PF
gi|94967370|ref|YP_589418.1| External link a3 SF
  a3 PF
gi|118480051|ref|YP_897202.1| External link 31 SF
  31 PF
gi|30023008|ref|NP_834639.1| External link bc SF
  bc PF
gi|30265006|ref|NP_847383.1| External link ba SF
  ba PF
gi|111020732|ref|YP_703704.1| External link 3r SF
  3r PF
gi|49187826|ref|YP_031078.1| External link b0 SF
  b0 PF
gi|150018294|ref|YP_001310548.1| External link 03 SF
  03 PF
gi|108763023|ref|YP_633274.1| External link m1 SF
  m1 PF
gi|56418973|ref|YP_146291.1| External link gk SF
  gk PF
gi|172040063|ref|YP_001799777.1| External link 7h SF
  7h PF
gi|75910066|ref|YP_324362.1| External link va SF
  va PF
gi|17230654|ref|NP_487202.1| External link no SF
  no PF
gi|186684146|ref|YP_001867342.1| External link 9j SF
  9j PF
gi|54023099|ref|YP_117341.1| External link nf SF
  nf PF
gi|52840853|ref|YP_094652.1| External link x7 SF
  x7 PF
gi|160878259|ref|YP_001557227.1| External link 5z SF
  5z PF
gi|124484839|ref|YP_001029455.1| External link 4l SF
  4l PF
gi|126698600|ref|YP_001087497.1| External link 3x SF
  3x PF
gi|150388453|ref|YP_001318502.1| External link 0n SF
  0n PF
gi|17227841|ref|NP_484389.1| External link no SF
  no PF
gi|154685067|ref|YP_001420228.1| External link 2o SF
  2o PF
gi|89892921|ref|YP_516408.1| External link d2 SF
  d2 PF
gi|159898225|ref|YP_001544472.1| External link 5u SF
  5u PF
gi|126699027|ref|YP_001087924.1| External link 3x SF
  3x PF
gi|126699120|ref|YP_001088017.1| External link 3x SF
  3x PF