DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|17988987|ref|NP_541620.1| External link bm SF
  bm PF
gi|23500383|ref|NP_699823.1| External link br SF
  br PF
gi|189022764|ref|YP_001932505.1| External link 91 SF
  91 PF
gi|157370754|ref|YP_001478743.1| External link 7e SF
  7e PF
gi|83269492|ref|YP_418783.1| External link by SF
  by PF
gi|161620697|ref|YP_001594583.1| External link 6z SF
  6z PF
gi|94313197|ref|YP_586406.1| External link r4 SF
  r4 PF
gi|148558255|ref|YP_001257619.1| External link 1k SF
  1k PF
gi|62317510|ref|YP_223363.1| External link b3 SF
  b3 PF
gi|86158682|ref|YP_465467.1| External link ae SF
  ae PF
gi|50954983|ref|YP_062271.1| External link lx SF
  lx PF
gi|26250231|ref|NP_756271.1| External link e0 SF
  e0 PF
gi|146305025|ref|YP_001192341.1| External link 02 SF
  02 PF
gi|51893865|ref|YP_076556.1| External link sb SF
  sb PF
gi|21226794|ref|NP_632716.1| External link mz SF
  mz PF
gi|150401573|ref|YP_001325339.1| External link 4v SF
  4v PF
gi|14590511|ref|NP_142579.1| External link ph SF
  ph PF
gi|15897210|ref|NP_341815.1| External link ss SF
  ss PF
gi|15804129|ref|NP_290168.1| External link e1 SF
  e1 PF
gi|25027628|ref|NP_737682.1| External link co SF
  co PF
gi|124485283|ref|YP_001029899.1| External link 4l SF
  4l PF
gi|91772425|ref|YP_565117.1| External link m9 SF
  m9 PF
gi|126465816|ref|YP_001040925.1| External link 0e SF
  0e PF
gi|14521630|ref|NP_127106.1| External link pb SF
  pb PF
gi|15789927|ref|NP_279751.1| External link hb SF
  hb PF
gi|170680544|ref|YP_001745881.1| External link 8k SF
  8k PF
gi|145590302|ref|YP_001152304.1| External link 5a SF
  5a PF
ENSBTAP00000026054 External link bv SF
  bv PF
jgi|Lacbi1|309451|eu2.Lbscf0040g00770 External link lo SF
  lo PF
gi|45357599|ref|NP_987156.1| External link m2 SF
  m2 PF
gi|70607011|ref|YP_255881.1| External link za SF
  za PF
jgi|Ost9901_3|30136|eugene.0200010323 External link oz SF
  oz PF
gi|147921602|ref|YP_684581.1| External link 3n SF
  3n PF
gi|110668402|ref|YP_658213.1| External link 1w SF
  1w PF
gi|117625868|ref|YP_859191.1| External link 1j SF
  1j PF
gi|18312174|ref|NP_558841.1| External link pc SF
  pc PF
jgi|Sorbi1|5053517|Sb03g031160 External link oj SF
  oj PF
gi|159041952|ref|YP_001541204.1| External link 6n SF
  6n PF No hits
PKH_094340 External link fw SF
  fw PF No hits
gi|171184517|ref|YP_001793436.1| External link 8h SF
  8h PF
gi|57641959|ref|YP_184437.1| External link tk SF
  tk PF
gi|124027998|ref|YP_001013318.1| External link 5m SF
  5m PF
gi|70606459|ref|YP_255329.1| External link za SF
  za PF
gi|15790412|ref|NP_280236.1| External link hb SF
  hb PF No hits
gi|73667745|ref|YP_303760.1| External link fu SF
  fu PF
gi|15920533|ref|NP_376202.1| External link sv SF
  sv PF
gi|148642691|ref|YP_001273204.1| External link 1p SF
  1p PF
gi|170680544|ref|YP_001745881.1| External link 9t SF
  9t PF
PF11_0469 pl SF
  pl PF No hits
gi|169235648|ref|YP_001688848.1| External link 8m SF
  8m PF