DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Ribbon-helix-helix.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
30214.m002365 External link rk SF
  rk PF
gi|186682661|ref|YP_001865857.1| External link 9j SF
  9j PF
gi|148642424|ref|YP_001272937.1| External link 1p SF
  1p PF
gi|124027101|ref|YP_001012421.1| External link 5m SF
  5m PF
gi|15645951|ref|NP_208130.1| External link hp SF
  hp PF
gi|85859862|ref|YP_462064.1| External link yt SF
  yt PF
gi|73669740|ref|YP_305755.1| External link fu SF
  fu PF
gi|91776207|ref|YP_545963.1| External link m7 SF
  m7 PF
gi|89110531|ref|AP_004311.1| External link ew SF
  ew PF
gi|20092868|ref|NP_618943.1| External link ma SF
  ma PF
gi|157158189|ref|YP_001464948.1| External link 6l SF
  6l PF
gi|20090614|ref|NP_616689.1| External link ma SF
  ma PF
gi|108563710|ref|YP_628026.1| External link h1 SF
  h1 PF
gi|45357583|ref|NP_987140.1| External link m2 SF
  m2 PF
gi|157149092|ref|YP_001456411.1| External link 5x SF
  5x PF
gi|21226944|ref|NP_632866.1| External link mz SF
  mz PF
gi|150402941|ref|YP_001330235.1| External link 5j SF
  5j PF
gi|20094938|ref|NP_614785.1| External link mn SF
  mn PF
gi|15668251|ref|NP_247044.1| External link mj SF
  mj PF
gi|39998071|ref|NP_954022.1| External link gs SF
  gs PF
gi|15612322|ref|NP_223975.1| External link hq SF
  hq PF
gi|21226768|ref|NP_632690.1| External link mz SF
  mz PF
gi|167625634|ref|YP_001675928.1| External link 8l SF
  8l PF
gi|161529164|ref|YP_001582990.1| External link 6e SF
  6e PF
gi|76801175|ref|YP_326183.1| External link np SF
  np PF
gi|15668729|ref|NP_247528.1| External link mj SF
  mj PF
gi|170750457|ref|YP_001756717.1| External link 7w SF
  7w PF
gi|78357996|ref|YP_389445.1| External link ds SF
  ds PF
gi|82545844|ref|YP_409791.1| External link sq SF
  sq PF
gi|109946884|ref|YP_664112.1| External link hl SF
  hl PF
gi|148558038|ref|YP_001257749.1| External link 1k SF
  1k PF
gi|84490010|ref|YP_448242.1| External link m4 SF
  m4 PF
gi|188528127|ref|YP_001910814.1| External link 9n SF
  9n PF
gi|15921814|ref|NP_377483.1| External link sv SF
  sv PF
gi|170679661|ref|YP_001745731.1| External link 9t SF
  9t PF
gi|17988831|ref|NP_541464.1| External link bm SF
  bm PF
gi|15678765|ref|NP_275882.1| External link md SF
  md PF
gi|116753974|ref|YP_843092.1| External link 11 SF
  11 PF
gi|71905718|ref|YP_283305.1| External link dj SF
  dj PF
gi|195953770|ref|YP_002122060.1| External link e8 SF
  e8 PF
gi|14521641|ref|NP_127117.1| External link pb SF
  pb PF
gi|193212136|ref|YP_001998089.1| External link ev SF
  ev PF
gi|29144207|ref|NP_807549.1| External link es SF
  es PF
gi|150401605|ref|YP_001325371.1| External link 4v SF
  4v PF
gi|154149409|ref|YP_001406434.1| External link 00 SF
  00 PF
gi|116625763|ref|YP_827919.1| External link 25 SF
  25 PF
gi|91773975|ref|YP_566667.1| External link m9 SF
  m9 PF
gi|150007259|ref|YP_001302002.1| External link 0g SF
  0g PF
gi|170722177|ref|YP_001749865.1| External link 8v SF
  8v PF
gi|46581295|ref|YP_012103.1| External link dv SF
  dv PF