DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: C-terminal effector domain of the bipartite response regulators.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|167622976|ref|YP_001673270.1| External link 8l SF
  8l PF
gi|157960820|ref|YP_001500854.1| External link 6t SF
  6t PF
gi|170727962|ref|YP_001761988.1| External link 88 SF
  88 PF No hits
gi|118472313|ref|YP_884845.1| External link 3e SF
  3e PF
gi|158313332|ref|YP_001505840.1| External link 6p SF
  6p PF
gi|159039781|ref|YP_001539034.1| External link 61 SF
  61 PF
gi|152965293|ref|YP_001361077.1| External link 58 SF
  58 PF
gi|119964403|ref|YP_947170.1| External link 56 SF
  56 PF
gi|116669817|ref|YP_830750.1| External link 1f SF
  1f PF
gi|156740087|ref|YP_001430216.1| External link 77 SF
  77 PF
gi|159898675|ref|YP_001544922.1| External link 5u SF
  5u PF
gi|56751363|ref|YP_172064.1| External link x3 SF
  x3 PF
gi|194365569|ref|YP_002028179.1| External link e9 SF
  e9 PF
gi|158425989|ref|YP_001527281.1| External link 75 SF
  75 PF
gi|29829512|ref|NP_824146.1| External link s9 SF
  s9 PF
gi|59713744|ref|YP_206519.1| External link vf SF
  vf PF
gi|156936234|ref|YP_001440151.1| External link 69 SF
  69 PF
gi|94314717|ref|YP_587926.1| External link r4 SF
  r4 PF
gi|182416279|ref|YP_001821345.1| External link 8i SF
  8i PF
gi|120435017|ref|YP_860703.1| External link 1s SF
  1s PF
gi|160901173|ref|YP_001566755.1| External link 7d SF
  7d PF
gi|29828154|ref|NP_822788.1| External link s9 SF
  s9 PF
gi|89901178|ref|YP_523649.1| External link rx SF
  rx PF
gi|91784077|ref|YP_559283.1| External link b4 SF
  b4 PF
gi|16080354|ref|NP_391181.1| External link bs SF
Gene name: yvqA  bs PF
gi|124382327|ref|YP_001023857.1| External link 38 SF
  38 PF
gi|76819124|ref|YP_337342.1| External link bz SF
  bz PF
gi|169829556|ref|YP_001699714.1| External link 7z SF
  7z PF
gi|124383508|ref|YP_001026567.1| External link 38 SF
  38 PF
gi|90421804|ref|YP_530174.1| External link rg SF
  rg PF
gi|126437076|ref|YP_001072767.1| External link 22 SF
  22 PF
gi|120609021|ref|YP_968699.1| External link 4t SF
  4t PF
gi|94311936|ref|YP_585146.1| External link r4 SF
  r4 PF
gi|147672319|ref|YP_001215339.1| External link 15 SF
  15 PF
gi|87200450|ref|YP_497707.1| External link nv SF
  nv PF
gi|188591029|ref|YP_001795629.1| External link 9x SF
  9x PF
gi|156976951|ref|YP_001447857.1| External link 65 SF
  65 PF
gi|24115626|ref|NP_710136.1| External link s0 SF
  s0 PF
gi|186684285|ref|YP_001867481.1| External link 9j SF
  9j PF
gi|115360612|ref|YP_777749.1| External link 0u SF
  0u PF
gi|158333980|ref|YP_001515152.1| External link 81 SF
  81 PF
gi|182437267|ref|YP_001824986.1| External link 7n SF
  7n PF
gi|171058336|ref|YP_001790685.1| External link 7i SF
  7i PF
gi|116516655|ref|YP_815857.1| External link 47 SF
  47 PF
gi|121594708|ref|YP_986604.1| External link 43 SF
  43 PF
gi|189439165|ref|YP_001954246.1| External link e6 SF
  e6 PF No hits
gi|83312545|ref|YP_422809.1| External link m5 SF
  m5 PF
gi|110802565|ref|YP_698155.1| External link 5n SF
  5n PF
gi|152970615|ref|YP_001335724.1| External link 2k SF
  2k PF
gi|49485531|ref|YP_042752.1| External link ar SF
  ar PF