DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|18977778|ref|NP_579135.1| External link pu SF
  pu PF
gi|120435799|ref|YP_861485.1| External link 1s SF
  1s PF
gi|57641812|ref|YP_184290.1| External link tk SF
  tk PF
gi|14521061|ref|NP_126536.1| External link pb SF
  pb PF
gi|14590822|ref|NP_142894.1| External link ph SF
  ph PF
gi|116514445|ref|YP_813351.1| External link 50 SF
  50 PF
gi|18312882|ref|NP_559549.1| External link pc SF
  pc PF
gi|145591412|ref|YP_001153414.1| External link 5a SF
  5a PF
gi|18976807|ref|NP_578164.1| External link pu SF
  pu PF
gi|78044501|ref|YP_358972.1| External link c9 SF
  c9 PF
gi|104774349|ref|YP_619329.1| External link ld SF
  ld PF
gi|169824999|ref|YP_001692610.1| External link 8g SF
  8g PF
gi|70608040|ref|YP_256910.1| External link za SF
  za PF
gi|146295124|ref|YP_001178895.1| External link 1q SF
  1q PF
gi|18977252|ref|NP_578609.1| External link pu SF
  pu PF
gi|14590821|ref|NP_142893.1| External link ph SF
  ph PF
gi|14521501|ref|NP_126977.1| External link pb SF
  pb PF
gi|85859118|ref|YP_461320.1| External link yt SF
  yt PF
gi|20088949|ref|NP_615024.1| External link ma SF
  ma PF
gi|14521402|ref|NP_126878.1| External link pb SF
  pb PF
gi|147921662|ref|YP_684519.1| External link 3n SF
  3n PF No hits
gi|148265553|ref|YP_001232259.1| External link 3g SF
  3g PF
gi|162448982|ref|YP_001611349.1| External link 60 SF
  60 PF
gi|170289592|ref|YP_001739830.1| External link 92 SF
  92 PF
gi|157364171|ref|YP_001470938.1| External link 5v SF
  5v PF
gi|15643738|ref|NP_228786.1| External link tm SF
  tm PF
gi|148270880|ref|YP_001245340.1| External link 0v SF
  0v PF
gi|154245864|ref|YP_001416822.1| External link 2d SF
  2d PF No hits
gi|169628083|ref|YP_001701732.1| External link 8c SF
  8c PF
gi|56696173|ref|YP_166529.1| External link sg SF
  sg PF
gi|158425327|ref|YP_001526619.1| External link 75 SF
  75 PF No hits
gi|118468590|ref|YP_887801.1| External link 3e SF
  3e PF No hits
gi|88601333|ref|YP_501511.1| External link m6 SF
  m6 PF
30227.m001800 External link rk SF
  rk PF
gi|150019505|ref|YP_001311759.1| External link 03 SF
  03 PF
gi|154246769|ref|YP_001417727.1| External link 2d SF
  2d PF
gi|120603391|ref|YP_967791.1| External link 0t SF
  0t PF
gi|90020120|ref|YP_525947.1| External link d0 SF
  d0 PF
gi|163851026|ref|YP_001639069.1| External link 6r SF
  6r PF
gi|182415843|ref|YP_001820909.1| External link 8i SF
  8i PF
gi|162451236|ref|YP_001613603.1| External link 60 SF
  60 PF
gi|158520373|ref|YP_001528243.1| External link 6c SF
  6c PF
gi|15838218|ref|NP_298906.1| External link xf SF
  xf PF
gi|170730401|ref|YP_001775834.1| External link 8o SF
  8o PF
gi|153003037|ref|YP_001377362.1| External link 55 SF
  55 PF
gi|182681774|ref|YP_001829934.1| External link 7m SF
  7m PF
gi|46579020|ref|YP_009828.1| External link dv SF
  dv PF
gi|189913025|ref|YP_001964914.1| External link f2 SF
  f2 PF
gi|71734656|ref|YP_276919.1| External link qs SF
  qs PF
gi|66048017|ref|YP_237858.1| External link ud SF
  ud PF