DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|111023508|ref|YP_706480.1| External link 3r SF
  3r PF
gi|111021767|ref|YP_704739.1| External link 3r SF
  3r PF No hits
jgi|Poptr1_1|795766|fgenesh4_pg.C_scaffold_19396000001 External link pt SF
  pt PF
gi|118471403|ref|YP_885242.1| External link 3e SF
  3e PF
gi|158314755|ref|YP_001507263.1| External link 6p SF
  6p PF
gi|120401187|ref|YP_951016.1| External link 28 SF
  28 PF
gi|118472421|ref|YP_888730.1| External link 3e SF
  3e PF
gi|121593041|ref|YP_984937.1| External link 43 SF
  43 PF
gi|152998387|ref|YP_001343222.1| External link 0z SF
  0z PF
gi|150398116|ref|YP_001328583.1| External link 2m SF
  2m PF
gi|170751206|ref|YP_001757466.1| External link 7w SF
  7w PF
gi|62317252|ref|YP_223105.1| External link b3 SF
  b3 PF
gi|134102166|ref|YP_001107827.1| External link 18 SF
  18 PF
gi|116754189|ref|YP_843307.1| External link 11 SF
  11 PF
gi|126443778|ref|YP_001062181.1| External link 36 SF
  36 PF
gi|134101890|ref|YP_001107551.1| External link 18 SF
  18 PF
gi|113866714|ref|YP_725203.1| External link 2j SF
  2j PF
gi|124265752|ref|YP_001019756.1| External link 14 SF
  14 PF
gi|172064466|ref|YP_001812117.1| External link 85 SF
  85 PF
gi|56964477|ref|YP_176208.1| External link x4 SF
  x4 PF
gi|37522250|ref|NP_925627.1| External link gv SF
  gv PF
gi|15889184|ref|NP_354865.1| External link au SF
  au PF
gi|109898776|ref|YP_662031.1| External link px SF
  px PF
gi|170783222|ref|YP_001711556.1| External link 87 SF
  87 PF
gi|121600021|ref|YP_991999.1| External link 1m SF
  1m PF
gi|15891143|ref|NP_356815.1| External link au SF
  au PF
gi|146293108|ref|YP_001183532.1| External link 2a SF
  2a PF
gi|145225645|ref|YP_001136323.1| External link 4h SF
  4h PF
gi|116692395|ref|YP_837928.1| External link 5l SF
  5l PF
gi|146302951|ref|YP_001190267.1| External link 02 SF
  02 PF
gi|119384209|ref|YP_915265.1| External link 27 SF
  27 PF
gi|83595014|ref|YP_428766.1| External link rb SF
  rb PF
gi|16759299|ref|NP_454916.1| External link ty SF
  ty PF
gi|116671396|ref|YP_832329.1| External link 1f SF
  1f PF
gi|163852220|ref|YP_001640263.1| External link 6r SF
  6r PF
gi|170290115|ref|YP_001736931.1| External link 7v SF
  7v PF
gi|148824493|ref|YP_001289247.1| External link 51 SF
  51 PF
gi|62182359|ref|YP_218776.1| External link x6 SF
  x6 PF
gi|110644084|ref|YP_671814.1| External link 0m SF
  0m PF
gi|172060697|ref|YP_001808349.1| External link 85 SF
  85 PF
gi|153000737|ref|YP_001366418.1| External link 1a SF
  1a PF
gi|163839303|ref|YP_001623708.1| External link 7f SF
  7f PF
gi|13470605|ref|NP_102174.1| External link mk SF
  mk PF
gi|15677499|ref|NP_274655.1| External link nm SF
  nm PF
gi|91790086|ref|YP_551038.1| External link p6 SF
  p6 PF
gi|50842700|ref|YP_055927.1| External link ac SF
  ac PF
gi|114569610|ref|YP_756290.1| External link 2x SF
  2x PF
gi|160898559|ref|YP_001564141.1| External link 7d SF
  7d PF
gi|170736456|ref|YP_001777716.1| External link 7j SF
  7j PF
gi|146305285|ref|YP_001185750.1| External link 4y SF
  4y PF