DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Homeodomain-like.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
jgi|Nemve1|224521|fgenesh1_pg.scaffold_4933000001 External link nw SF
  nw PF
30231.m003590 External link rk SF
  rk PF
gi|126433439|ref|YP_001069130.1| External link 22 SF
  22 PF
gi|146302049|ref|YP_001196640.1| External link 1z SF
  1z PF
gi|118471966|ref|YP_886533.1| External link 3e SF
  3e PF
gi|120406857|ref|YP_956686.1| External link 28 SF
  28 PF
gi|20091767|ref|NP_617842.1| External link ma SF
  ma PF
gi|49183970|ref|YP_027222.1| External link b0 SF
  b0 PF
gi|56461541|ref|YP_156822.1| External link il SF
  il PF
gi|16760088|ref|NP_455705.1| External link ty SF
  ty PF
gi|134295680|ref|YP_001119415.1| External link 30 SF
  30 PF
gi|83815483|ref|YP_446878.1| External link rv SF
  rv PF
gi|194448082|ref|YP_002045615.1| External link 9r SF
  9r PF
gi|148659922|ref|YP_001281445.1| External link 4q SF
  4q PF
gi|116692497|ref|YP_838030.1| External link 5l SF
  5l PF
gi|152966002|ref|YP_001361786.1| External link 58 SF
  58 PF
gi|118617528|ref|YP_905860.1| External link 5o SF
  5o PF
gi|73539888|ref|YP_294408.1| External link rl SF
  rl PF
gi|91210266|ref|YP_540252.1| External link e2 SF
  e2 PF
gi|49187862|ref|YP_031115.1| External link b0 SF
  b0 PF
gi|124385631|ref|YP_001027948.1| External link 38 SF
  38 PF
gi|158520245|ref|YP_001528115.1| External link 6c SF
  6c PF
gi|89055122|ref|YP_510573.1| External link ja SF
  ja PF
gi|108802168|ref|YP_642365.1| External link yb SF
  yb PF
gi|111224886|ref|YP_715680.1| External link 1b SF
  1b PF
gi|113971029|ref|YP_734822.1| External link 0f SF
  0f PF
gi|17987914|ref|NP_540548.1| External link bm SF
  bm PF
gi|110833070|ref|YP_691929.1| External link 2b SF
  2b PF
gi|121598768|ref|YP_992989.1| External link 1m SF
  1m PF
gi|54024564|ref|YP_118806.1| External link nf SF
  nf PF
gi|170018493|ref|YP_001723447.1| External link 9d SF
  9d PF
gi|119718330|ref|YP_925295.1| External link 0j SF
  0j PF
gi|27364277|ref|NP_759805.1| External link vv SF
  vv PF
gi|169795009|ref|YP_001712802.1| External link 7t SF
  7t PF
gi|169628081|ref|YP_001701730.1| External link 8c SF
  8c PF
gi|116493633|ref|YP_805367.1| External link 1o SF
  1o PF
gi|15597962|ref|NP_251456.1| External link pa SF
  pa PF
gi|82703088|ref|YP_412654.1| External link nl SF
  nl PF
gi|118468730|ref|YP_888308.1| External link 3e SF
  3e PF
gi|77457508|ref|YP_347013.1| External link pn SF
  pn PF
gi|60681520|ref|YP_211664.1| External link fl SF
  fl PF
gi|161829799|ref|YP_001596885.1| External link 5w SF
  5w PF
gi|78064900|ref|YP_367669.1| External link bk SF
  bk PF
gi|152998924|ref|YP_001364605.1| External link 1a SF
  1a PF
gi|156934956|ref|YP_001438872.1| External link 69 SF
  69 PF
gi|92115101|ref|YP_575029.1| External link c8 SF
  c8 PF
gi|53719418|ref|YP_108404.1| External link pe SF
  pe PF
gi|116693493|ref|YP_839026.1| External link 5l SF
  5l PF
gi|21220197|ref|NP_625976.1| External link sf SF
  sf PF
gi|110639243|ref|YP_679452.1| External link 37 SF
  37 PF