DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: lambda repressor-like DNA-binding domains.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|92118591|ref|YP_578320.1| External link nb SF
  nb PF
gi|27380591|ref|NP_772120.1| External link bj SF
  bj PF
gi|58038796|ref|YP_190760.1| External link ox SF
  ox PF
gi|162149108|ref|YP_001603569.1| External link 7c SF
  7c PF
gi|26249038|ref|NP_755078.1| External link e0 SF
  e0 PF No hits
gi|33602496|ref|NP_890056.1| External link bo SF
  bo PF No hits
gi|15800840|ref|NP_286856.1| External link e1 SF
  e1 PF No hits
gi|83643489|ref|YP_431924.1| External link hc SF
  hc PF No hits
gi|157370277|ref|YP_001478266.1| External link 7e SF
  7e PF No hits
gi|152978884|ref|YP_001344513.1| External link 4k SF
  4k PF No hits
gi|153001079|ref|YP_001366760.1| External link 1a SF
  1a PF No hits
gi|15887792|ref|NP_353473.1| External link au SF
  au PF No hits
gi|148653140|ref|YP_001280233.1| External link 1v SF
  1v PF No hits
gi|50085300|ref|YP_046810.1| External link ab SF
  ab PF No hits
gi|169633043|ref|YP_001706779.1| External link 7l SF
  7l PF No hits
gi|15830761|ref|NP_309534.1| External link eo SF
  eo PF No hits
gi|148827553|ref|YP_001292306.1| External link 4p SF
  4p PF No hits
gi|194737104|ref|YP_002117131.1| External link d8 SF
  d8 PF No hits
gi|16129318|ref|NP_415875.1| External link ec SF
Gene name: ydaS  ec PF No hits
gi|37527349|ref|NP_930693.1| External link pd SF
  pd PF No hits
gi|169633406|ref|YP_001707142.1| External link 7l SF
  7l PF No hits
gi|16129528|ref|NP_416087.1| External link ec SF
Gene name: dicC  ec PF No hits
gi|169634001|ref|YP_001707737.1| External link 7l SF
  7l PF No hits
gi|91211687|ref|YP_541673.1| External link e2 SF
  e2 PF No hits
gi|160876600|ref|YP_001555916.1| External link 7a SF
  7a PF No hits
gi|157155456|ref|YP_001462858.1| External link 6l SF
  6l PF No hits
gi|172087747|ref|YP_001816718.1| External link vf SF
  vf PF No hits
gi|15801532|ref|NP_287549.1| External link e1 SF
  e1 PF No hits
gi|194366292|ref|YP_002028902.1| External link e9 SF
  e9 PF
gi|157159744|ref|YP_001457062.1| External link 72 SF
  72 PF No hits
gi|24112290|ref|NP_706800.1| External link s0 SF
  s0 PF No hits
gi|15801985|ref|NP_288006.1| External link e1 SF
  e1 PF No hits
gi|170717357|ref|YP_001784465.1| External link 7p SF
  7p PF No hits
gi|161613270|ref|YP_001587235.1| External link 78 SF
  78 PF No hits
gi|15837103|ref|NP_297791.1| External link xf SF
  xf PF No hits
gi|15801492|ref|NP_287509.1| External link e1 SF
  e1 PF No hits
gi|160875135|ref|YP_001554451.1| External link 7a SF
  7a PF No hits
gi|15832019|ref|NP_310792.1| External link eo SF
  eo PF No hits
gi|49475544|ref|YP_033585.1| External link ho SF
  ho PF No hits
gi|15830324|ref|NP_309097.1| External link eo SF
  eo PF No hits
gi|145298595|ref|YP_001141436.1| External link 44 SF
  44 PF No hits
gi|126207982|ref|YP_001053207.1| External link 1c SF
  1c PF No hits
gi|152983275|ref|YP_001353908.1| External link 4d SF
  4d PF No hits
gi|15831462|ref|NP_310235.1| External link eo SF
  eo PF No hits
gi|26988282|ref|NP_743707.1| External link ps SF
  ps PF No hits
gi|170682538|ref|YP_001743224.1| External link 9t SF
  9t PF No hits
gi|68250057|ref|YP_249169.1| External link hf SF
  hf PF No hits
gi|15831020|ref|NP_309793.1| External link eo SF
  eo PF No hits
gi|167034438|ref|YP_001669669.1| External link 7g SF
  7g PF No hits
gi|170682538|ref|YP_001743224.1| External link 8k SF
  8k PF No hits