DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
jgi|Phypa1_1|103531|fgenesh1_pg.scaffold_2883000002 External link pw SF
  pw PF
gi|154245062|ref|YP_001416020.1| External link 2d SF
  2d PF
30212.m002488 External link rk SF
  rk PF
gi|52784266|ref|YP_090095.1| External link lc SF
  lc PF
gi|117619941|ref|YP_855280.1| External link 33 SF
  33 PF
gi|119775907|ref|YP_928647.1| External link 2p SF
  2p PF
gi|152996128|ref|YP_001340963.1| External link 0z SF
  0z PF No hits
gi|52078893|ref|YP_077684.1| External link lf SF
  lf PF
gi|34499091|ref|NP_903306.1| External link vi SF
  vi PF
gi|86358368|ref|YP_470260.1| External link rz SF
  rz PF
gi|190892491|ref|YP_001979033.1| External link 9p SF
  9p PF
gi|145297799|ref|YP_001140640.1| External link 44 SF
  44 PF
gi|192288807|ref|YP_001989412.1| External link e7 SF
  e7 PF
gi|39933090|ref|NP_945366.1| External link rd SF
  rd PF
gi|187479364|ref|YP_787389.1| External link 9k SF
  9k PF
gi|148546536|ref|YP_001266638.1| External link 0a SF
  0a PF
gi|160877219|ref|YP_001556535.1| External link 7a SF
  7a PF
gi|71736855|ref|YP_273506.1| External link qs SF
  qs PF
gi|167035120|ref|YP_001670351.1| External link 7g SF
  7g PF
gi|167647617|ref|YP_001685280.1| External link 7o SF
  7o PF
gi|24375818|ref|NP_719861.1| External link sl SF
  sl PF
gi|148254279|ref|YP_001238864.1| External link 42 SF
  42 PF
gi|134292617|ref|YP_001116353.1| External link 30 SF
  30 PF
gi|58579891|ref|YP_198907.1| External link xo SF
  xo PF
gi|126176208|ref|YP_001052357.1| External link 2z SF
  2z PF
gi|163854987|ref|YP_001629285.1| External link 5y SF
  5y PF
gi|39933449|ref|NP_945725.1| External link rd SF
  rd PF
gi|159042801|ref|YP_001531595.1| External link 6q SF
  6q PF
gi|153002502|ref|YP_001368183.1| External link 1a SF
  1a PF
gi|158424397|ref|YP_001525689.1| External link 75 SF
  75 PF
gi|26991279|ref|NP_746704.1| External link ps SF
  ps PF
gi|120554653|ref|YP_959004.1| External link 1n SF
  1n PF
gi|192288443|ref|YP_001989048.1| External link e7 SF
  e7 PF
30316.m000024 External link rk SF
  rk PF
gi|86750363|ref|YP_486859.1| External link rj SF
  rj PF
gi|170723065|ref|YP_001750753.1| External link 8v SF
  8v PF
gi|110678377|ref|YP_681384.1| External link 2r SF
  2r PF
gi|99082578|ref|YP_614732.1| External link ic SF
  ic PF
gi|30019487|ref|NP_831118.1| External link bc SF
  bc PF
gi|28378489|ref|NP_785381.1| External link lb SF
  lb PF
gi|160897302|ref|YP_001562884.1| External link 7d SF
  7d PF
gi|104782151|ref|YP_608649.1| External link pq SF
  pq PF
gi|83721601|ref|YP_441099.1| External link b5 SF
  b5 PF
gi|115352845|ref|YP_774684.1| External link 0u SF
  0u PF
gi|121601497|ref|YP_993279.1| External link 1m SF
  1m PF
gi|154685776|ref|YP_001420937.1| External link 2o SF
  2o PF
30231.m003763 External link rk SF
  rk PF
gi|89893674|ref|YP_517161.1| External link d2 SF
  d2 PF
gi|56420399|ref|YP_147717.1| External link gk SF
  gk PF
gi|13471763|ref|NP_103330.1| External link mk SF
  mk PF