DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|116052375|ref|YP_792686.1| External link 2t SF
  2t PF No hits
gi|15599537|ref|NP_253031.1| External link pa SF
  pa PF No hits
gi|72163315|ref|YP_290972.1| External link tf SF
  tf PF
gi|14591365|ref|NP_143443.1| External link ph SF
  ph PF
gi|116332940|ref|YP_794467.1| External link 52 SF
  52 PF
gi|157149800|ref|YP_001451201.1| External link 6s SF
  6s PF
gi|167646890|ref|YP_001684553.1| External link 7o SF
  7o PF
gi|126435417|ref|YP_001071108.1| External link 22 SF
  22 PF
gi|169834494|ref|YP_001694184.1| External link 8e SF
  8e PF
gi|119964193|ref|YP_947527.1| External link 56 SF
  56 PF
gi|31793036|ref|NP_855529.1| External link mc SF
  mc PF
gi|71904111|ref|YP_280914.1| External link zy SF
  zy PF
gi|18977968|ref|NP_579325.1| External link pu SF
  pu PF
gi|114570692|ref|YP_757372.1| External link 2x SF
  2x PF
gi|52841848|ref|YP_095647.1| External link x7 SF
  x7 PF
gi|125624522|ref|YP_001033005.1| External link 39 SF
  39 PF
gi|94994915|ref|YP_603013.1| External link tg SF
  tg PF
gi|194366997|ref|YP_002029607.1| External link e9 SF
  e9 PF
gi|29827709|ref|NP_822343.1| External link s9 SF
  s9 PF
gi|57642194|ref|YP_184672.1| External link tk SF
  tk PF
gi|57867413|ref|YP_189028.1| External link ep SF
  ep PF
gi|108759799|ref|YP_632417.1| External link m1 SF
  m1 PF
gi|158317485|ref|YP_001509993.1| External link 6p SF
  6p PF
gi|148654701|ref|YP_001274906.1| External link 4a SF
  4a PF
gi|30261194|ref|NP_843571.1| External link ba SF
  ba PF
gi|78049037|ref|YP_365212.1| External link xv SF
  xv PF
gi|75906721|ref|YP_321017.1| External link va SF
  va PF
gi|153954854|ref|YP_001395619.1| External link 16 SF
  16 PF
gi|116628276|ref|YP_820895.1| External link 4w SF
  4w PF
gi|125717018|ref|YP_001034151.1| External link 5b SF
  5b PF
gi|94969880|ref|YP_591928.1| External link a3 SF
  a3 PF
gi|29831236|ref|NP_825870.1| External link s9 SF
  s9 PF
gi|118462829|ref|YP_882055.1| External link 59 SF
  59 PF
gi|16125886|ref|NP_420450.1| External link cc SF
  cc PF
gi|70726763|ref|YP_253677.1| External link zh SF
  zh PF
gi|21221806|ref|NP_627585.1| External link sf SF
  sf PF
gi|172036727|ref|YP_001803228.1| External link 8t SF
  8t PF
gi|126700133|ref|YP_001089030.1| External link 3x SF
  3x PF
gi|116511644|ref|YP_808860.1| External link 4o SF
  4o PF
gi|159045673|ref|YP_001534467.1| External link 6q SF
  6q PF
gi|42782520|ref|NP_979767.1| External link bx SF
  bx PF
gi|28895287|ref|NP_801637.1| External link s8 SF
  s8 PF
gi|111024199|ref|YP_707171.1| External link 3r SF
  3r PF
gi|146300520|ref|YP_001195111.1| External link 1z SF
  1z PF
gi|134097225|ref|YP_001102886.1| External link 18 SF
  18 PF
gi|167630929|ref|YP_001681428.1| External link 8j SF
  8j PF
gi|120434449|ref|YP_860154.1| External link 1s SF
  1s PF
gi|16799683|ref|NP_469951.1| External link li SF
  li PF
gi|161508209|ref|YP_001578180.1| External link 79 SF
  79 PF
gi|150025797|ref|YP_001296623.1| External link 5d SF
  5d PF