DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: Homeodomain-like.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
30229.m006176 External link rk SF
  rk PF
gi|111222848|ref|YP_713642.1| External link 1b SF
  1b PF
gi|148821389|ref|YP_001286143.1| External link 51 SF
  51 PF
gi|118467192|ref|YP_884069.1| External link 59 SF
  59 PF
gi|118476588|ref|YP_893739.1| External link 31 SF
  31 PF
gi|116693797|ref|YP_839330.1| External link 5l SF
  5l PF
gi|182439694|ref|YP_001827413.1| External link 7n SF
  7n PF
gi|183980467|ref|YP_001848758.1| External link 8u SF
  8u PF
gi|78064021|ref|YP_373929.1| External link bk SF
  bk PF
gi|145223874|ref|YP_001134552.1| External link 4h SF
  4h PF
gi|49479986|ref|YP_037293.1| External link ko SF
  ko PF
gi|126432819|ref|YP_001068510.1| External link 22 SF
  22 PF
gi|15831612|ref|NP_310385.1| External link eo SF
  eo PF No hits
gi|146311453|ref|YP_001176527.1| External link 08 SF
  08 PF
gi|154684768|ref|YP_001419929.1| External link 2o SF
  2o PF
gi|116054204|ref|YP_788648.1| External link 2t SF
  2t PF
gi|111222505|ref|YP_713299.1| External link 1b SF
  1b PF
gi|114048375|ref|YP_738925.1| External link 24 SF
  24 PF
gi|24372971|ref|NP_717013.1| External link sl SF
  sl PF
gi|54297894|ref|YP_124263.1| External link le SF
  le PF
gi|150397405|ref|YP_001327872.1| External link 2m SF
  2m PF
gi|170019999|ref|YP_001724953.1| External link 9d SF
  9d PF
gi|157156310|ref|YP_001462941.1| External link 6l SF
  6l PF
gi|154245094|ref|YP_001416052.1| External link 2d SF
  2d PF
gi|162447635|ref|YP_001620767.1| External link 8b SF
  8b PF No hits
gi|188533938|ref|YP_001907735.1| External link ej SF
  ej PF
gi|126435330|ref|YP_001071021.1| External link 22 SF
  22 PF
gi|119868796|ref|YP_938748.1| External link 46 SF
  46 PF
gi|116686269|ref|YP_839516.1| External link 5l SF
  5l PF
gi|41409759|ref|NP_962595.1| External link av SF
  av PF
gi|29833709|ref|NP_828343.1| External link s9 SF
  s9 PF
gi|146301035|ref|YP_001195626.1| External link 1z SF
  1z PF
gi|190890824|ref|YP_001977366.1| External link 9p SF
  9p PF
gi|148659960|ref|YP_001281483.1| External link 4q SF
  4q PF
gi|184157906|ref|YP_001846245.1| External link 99 SF
  99 PF
gi|150017338|ref|YP_001309592.1| External link 03 SF
  03 PF
gi|170736904|ref|YP_001778164.1| External link 7j SF
  7j PF
gi|190890990|ref|YP_001977532.1| External link 9p SF
  9p PF
gi|23098132|ref|NP_691598.1| External link oi SF
  oi PF
gi|16081051|ref|NP_391879.1| External link bs SF
Gene name: yxaF  bs PF
gi|170018778|ref|YP_001723732.1| External link 9d SF
  9d PF
gi|146281514|ref|YP_001171667.1| External link 2e SF
  2e PF
gi|118468501|ref|YP_887823.1| External link 3e SF
  3e PF
gi|120403991|ref|YP_953820.1| External link 28 SF
  28 PF
gi|52144368|ref|YP_082460.1| External link x5 SF
  x5 PF
gi|119963141|ref|YP_946245.1| External link 56 SF
  56 PF
gi|170683234|ref|YP_001743604.1| External link 9t SF
  9t PF
gi|77359604|ref|YP_339179.1| External link ha SF
  ha PF
gi|76818784|ref|YP_337444.1| External link bz SF
  bz PF
gi|91210863|ref|YP_540849.1| External link e2 SF
  e2 PF