DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|78042752|ref|YP_358967.1| External link c9 SF
  c9 PF
gi|53722346|ref|YP_111331.1| External link pe SF
  pe PF
gi|76818669|ref|YP_335500.1| External link bz SF
  bz PF
gi|54309388|ref|YP_130408.1| External link he SF
  he PF
gi|71280619|ref|YP_270034.1| External link lw SF
  lw PF
gi|91794899|ref|YP_564550.1| External link hw SF
  hw PF
gi|56461224|ref|YP_156505.1| External link il SF
  il PF
gi|156976331|ref|YP_001447237.1| External link 65 SF
  65 PF
gi|146306550|ref|YP_001187015.1| External link 4y SF
  4y PF
gi|114565154|ref|YP_752668.1| External link 3w SF
  3w PF
gi|111023580|ref|YP_706552.1| External link 3r SF
  3r PF
gi|25029460|ref|NP_739514.1| External link co SF
  co PF
gi|57233770|ref|YP_182214.1| External link et SF
  et PF
gi|172063954|ref|YP_001811605.1| External link 85 SF
  85 PF No hits
gi|147920218|ref|YP_686015.1| External link 3n SF
  3n PF
gi|73749232|ref|YP_308471.1| External link dl SF
  dl PF
gi|124268795|ref|YP_001022799.1| External link 14 SF
  14 PF No hits
gi|157368352|ref|YP_001476341.1| External link 7e SF
  7e PF
gi|146303993|ref|YP_001191309.1| External link 02 SF
  02 PF
gi|54027475|ref|YP_121717.1| External link nf SF
  nf PF
gi|15839977|ref|NP_335014.1| External link mu SF
  mu PF
gi|148660345|ref|YP_001281868.1| External link 4q SF
  4q PF
gi|86739698|ref|YP_480098.1| External link fk SF
  fk PF
gi|134097457|ref|YP_001103118.1| External link 18 SF
  18 PF
gi|116330039|ref|YP_799757.1| External link 3h SF
  3h PF
gi|148821777|ref|YP_001286531.1| External link 51 SF
  51 PF
gi|126435302|ref|YP_001070993.1| External link 22 SF
  22 PF
gi|120405638|ref|YP_955467.1| External link 28 SF
  28 PF
gi|159897101|ref|YP_001543348.1| External link 5u SF
  5u PF
gi|116329360|ref|YP_799080.1| External link 0k SF
  0k PF
gi|119961404|ref|YP_946914.1| External link 56 SF
  56 PF
gi|15607716|ref|NP_215090.1| External link mb SF
  mb PF
gi|31791758|ref|NP_854251.1| External link mc SF
  mc PF
gi|89053592|ref|YP_509043.1| External link ja SF
  ja PF
gi|119868768|ref|YP_938720.1| External link 46 SF
  46 PF
gi|108799658|ref|YP_639855.1| External link yb SF
  yb PF
gi|163838933|ref|YP_001623338.1| External link 7f SF
  7f PF
gi|170740064|ref|YP_001768719.1| External link 7s SF
  7s PF No hits
gi|121636494|ref|YP_976717.1| External link 07 SF
  07 PF
gi|145222619|ref|YP_001133297.1| External link 4h SF
  4h PF
gi|88603986|ref|YP_504164.1| External link m6 SF
  m6 PF
gi|88602697|ref|YP_502875.1| External link m6 SF
  m6 PF
gi|147919908|ref|YP_686339.1| External link 3n SF
  3n PF
gi|88602986|ref|YP_503164.1| External link m6 SF
  m6 PF
gi|154151091|ref|YP_001404709.1| External link 3p SF
  3p PF
gi|187479055|ref|YP_787080.1| External link 9k SF
  9k PF
gi|134098540|ref|YP_001104201.1| External link 18 SF
  18 PF
gi|134101508|ref|YP_001107169.1| External link 18 SF
  18 PF
gi|118497403|ref|YP_898453.1| External link 0b SF
  0b PF
gi|134301845|ref|YP_001121813.1| External link 3a SF
  3a PF