DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: lambda repressor-like DNA-binding domains.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|15669611|ref|NP_248424.1| External link mj SF
  mj PF
gi|113475555|ref|YP_721616.1| External link 4i SF
  4i PF
gi|17230004|ref|NP_486552.1| External link no SF
  no PF
gi|32472902|ref|NP_865896.1| External link pi SF
  pi PF
gi|55379381|ref|YP_137231.1| External link hm SF
  hm PF
gi|159035684|ref|YP_001534937.1| External link 61 SF
  61 PF
gi|56421374|ref|YP_148692.1| External link gk SF
  gk PF
gi|163938522|ref|YP_001643406.1| External link 62 SF
  62 PF
gi|152974345|ref|YP_001373862.1| External link 0w SF
  0w PF
gi|145596629|ref|YP_001160926.1| External link 1h SF
  1h PF
gi|154151116|ref|YP_001404734.1| External link 3p SF
  3p PF
gi|16554475|ref|NP_444199.1| External link hb SF
  hb PF
gi|169235739|ref|YP_001688939.1| External link 8m SF
  8m PF
gi|119719452|ref|YP_919947.1| External link 2v SF
  2v PF
gi|91772552|ref|YP_565244.1| External link m9 SF
  m9 PF
gi|126179238|ref|YP_001047203.1| External link 23 SF
  23 PF
gi|147919967|ref|YP_686279.1| External link 3n SF
  3n PF
gi|91776604|ref|YP_546360.1| External link m7 SF
  m7 PF
gi|89901010|ref|YP_523481.1| External link rx SF
  rx PF
gi|145592595|ref|YP_001156892.1| External link 1h SF
  1h PF
gi|91780942|ref|YP_556149.1| External link b4 SF
  b4 PF
gi|56698522|ref|YP_168898.1| External link sg SF
  sg PF
gi|119899345|ref|YP_934558.1| External link 0q SF
  0q PF
gi|89053166|ref|YP_508617.1| External link ja SF
  ja PF
gi|94310168|ref|YP_583378.1| External link r4 SF
  r4 PF
gi|163857884|ref|YP_001632182.1| External link 5y SF
  5y PF
gi|160895525|ref|YP_001561107.1| External link 7d SF
  7d PF
gi|91784379|ref|YP_559585.1| External link b4 SF
  b4 PF
gi|182436377|ref|YP_001824096.1| External link 7n SF
  7n PF
gi|134298402|ref|YP_001111898.1| External link 0c SF
  0c PF
gi|162449332|ref|YP_001611699.1| External link 60 SF
  60 PF
gi|92113491|ref|YP_573419.1| External link c8 SF
  c8 PF
gi|117626694|ref|YP_860017.1| External link 1j SF
  1j PF
gi|19704910|ref|NP_602405.1| External link fn SF
  fn PF
gi|94988428|ref|YP_596529.1| External link pk SF
  pk PF
gi|192291420|ref|YP_001992025.1| External link e7 SF
  e7 PF
gi|15896492|ref|NP_349841.1| External link ca SF
  ca PF
gi|150014927|ref|YP_001307181.1| External link 03 SF
  03 PF
gi|118444284|ref|YP_879117.1| External link 12 SF
  12 PF
gi|32266247|ref|NP_860279.1| External link hh SF
  hh PF
gi|167032741|ref|YP_001667972.1| External link 7g SF
  7g PF
gi|120611007|ref|YP_970685.1| External link 4t SF
  4t PF
gi|91214040|ref|YP_544026.1| External link e2 SF
  e2 PF
gi|148265766|ref|YP_001232472.1| External link 3g SF
  3g PF
gi|99080630|ref|YP_612784.1| External link ic SF
  ic PF
gi|169830890|ref|YP_001716872.1| External link 7u SF
  7u PF
gi|148656411|ref|YP_001276616.1| External link 4a SF
  4a PF
gi|158313503|ref|YP_001506011.1| External link 6p SF
  6p PF
gi|126435930|ref|YP_001071621.1| External link 22 SF
  22 PF
gi|169627870|ref|YP_001701519.1| External link 8c SF
  8c PF