DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: C2H2 and C2HC zinc fingers.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
ENSPTRP00000028170 External link xp SF
  xp PF
ENSPPYP00000016789 External link of SF
  of PF
ENSMUSP00000031976 External link mh SF
Gene name: Prdm5  mh PF
ENSPTRP00000028170 External link xq SF
  xq PF
ENSMUSP00000031976 External link mm SF
Gene name: Prdm5  mm PF
ENSPPYP00000016789 External link o5 SF
  o5 PF
ENSP00000264808 External link hs SF
Gene name: PRDM5  hs PF
ENSP00000264808 External link ht SF
Gene name: PRDM5  ht PF
ENSOANP00000023793 External link oh SF
  oh PF
ENSOANP00000023793 External link o2 SF
  o2 PF
ENSSTOP00000014774 External link g3 SF
  g3 PF
ENSDNOP00000014748 External link d6 SF
  d6 PF
ENSSTOP00000014774 External link gb SF
  gb PF
ENSDARP00000004889 External link df SF
  df PF
ENSORLP00000016227 External link ol SF
  ol PF
ENSDARP00000004889 External link da SF
  da PF
ENSGACP00000012338 External link g1 SF
  g1 PF
ENSGACP00000012338 External link gc SF
  gc PF
ENSTRUP00000000947 External link tq SF
  tq PF
ENSDNOP00000014748 External link d5 SF
  d5 PF
ENSORLP00000016227 External link o1 SF
  o1 PF
ENSTRUP00000000947 External link to SF
  to PF
GLEAN_08444 External link tj SF
  tj PF
GLEAN_13189 External link tj SF
  tj PF
GLEAN_12996 External link tj SF
  tj PF
GLEAN_13871 External link tj SF
  tj PF
CG10270-PA External link dn SF
Gene name: D19B  dn PF
GLEAN_11051 External link tj SF
  tj PF
GLEAN_11010 External link tj SF
  tj PF
FBpp0076725 External link dd SF
  dd PF No hits
FBpp0076725 External link de SF
  de PF No hits
FBpp0126724 External link dk SF
  dk PF
FBpp0152924 External link gd SF
  gd PF
FBpp0129244 External link ge SF
  ge PF
FBpp0265048 External link dy SF
  dy PF
AAEL004950-PA External link ax SF
  ax PF
AAEL004950-PA External link a4 SF
  a4 PF
AAEL010733-PA External link ax SF
  ax PF
AAEL010733-PA External link a4 SF
  a4 PF
Translation:11944 ie SF
  ie PF
Bmb031555 External link om SF
  om PF
jgi|Brafl1|66688|fgenesh2_pg.scaffold_11000149 External link bf SF
  bf PF
jgi|Brafl1|119658|estExt_fgenesh2_pg.C_320109 External link bf SF
  bf PF
jgi|Brafl1|122441|estExt_fgenesh2_pg.C_890004 External link bf SF
  bf PF
jgi|Brafl1|71737|fgenesh2_pg.scaffold_34000218 External link bf SF
  bf PF
jgi|Brafl1|65402|fgenesh2_pg.scaffold_7000108 External link bf SF
  bf PF
gi|156552039|ref|XP_001604023.1| External link nz SF
  nz PF
ENSCSAVP00000011297 External link c0 SF
  c0 PF
ENSCSAVP00000011297 External link i0 SF
  i0 PF
ENSCSAVP00000000511 External link c0 SF
  c0 PF