DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|116670089|ref|YP_831022.1| External link 1f SF
  1f PF
gi|119963731|ref|YP_947429.1| External link 56 SF
  56 PF
gi|83590525|ref|YP_430534.1| External link m8 SF
  m8 PF
gi|126698986|ref|YP_001087883.1| External link 3x SF
  3x PF
gi|24379943|ref|NP_721898.1| External link s6 SF
  s6 PF
gi|90961552|ref|YP_535468.1| External link lv SF
  lv PF
gi|170730626|ref|YP_001776059.1| External link 8o SF
  8o PF
gi|156744297|ref|YP_001434426.1| External link 77 SF
  77 PF
gi|78187348|ref|YP_375391.1| External link p7 SF
  p7 PF
gi|15902497|ref|NP_358047.1| External link st SF
  st PF
gi|23501083|ref|NP_697210.1| External link br SF
  br PF
gi|68535672|ref|YP_250377.1| External link jk SF
  jk PF
gi|152976746|ref|YP_001376263.1| External link 0w SF
  0w PF
gi|91781879|ref|YP_557085.1| External link b4 SF
  b4 PF
gi|49481356|ref|YP_038371.1| External link ko SF
  ko PF
gi|114326688|ref|YP_743845.1| External link 3m SF
  3m PF
gi|163842441|ref|YP_001626845.1| External link 6g SF
  6g PF
gi|82751185|ref|YP_416926.1| External link sk SF
  sk PF
gi|58581652|ref|YP_200668.1| External link xo SF
  xo PF
gi|56478156|ref|YP_159745.1| External link az SF
  az PF
gi|134095822|ref|YP_001100897.1| External link 5e SF
  5e PF
gi|87200076|ref|YP_497333.1| External link nv SF
  nv PF
gi|23465297|ref|NP_695900.1| External link bl SF
  bl PF
gi|91775126|ref|YP_544882.1| External link m7 SF
  m7 PF
gi|103485748|ref|YP_615309.1| External link ak SF
  ak PF
gi|189499814|ref|YP_001959284.1| External link 9e SF
  9e PF
gi|83721380|ref|YP_441849.1| External link b5 SF
  b5 PF
gi|89900440|ref|YP_522911.1| External link rx SF
  rx PF
gi|15835288|ref|NP_297047.1| External link cm SF
  cm PF
gi|153935482|ref|YP_001388690.1| External link 2u SF
  2u PF
gi|94993025|ref|YP_601124.1| External link pp SF
  pp PF
gi|50914840|ref|YP_060812.1| External link sp SF
  sp PF
gi|21221014|ref|NP_626793.1| External link sf SF
  sf PF
gi|148543936|ref|YP_001271306.1| External link 49 SF
  49 PF
gi|108800426|ref|YP_640623.1| External link yb SF
  yb PF
gi|170761730|ref|YP_001788274.1| External link 8s SF
  8s PF
gi|116627081|ref|YP_819700.1| External link 4w SF
  4w PF
gi|53720440|ref|YP_109426.1| External link pe SF
  pe PF
gi|21911069|ref|NP_665337.1| External link s7 SF
  s7 PF
gi|118579830|ref|YP_901080.1| External link 3c SF
  3c PF
gi|84623568|ref|YP_450940.1| External link xz SF
  xz PF
gi|25010169|ref|NP_734564.1| External link s5 SF
  s5 PF
gi|126436049|ref|YP_001071740.1| External link 22 SF
  22 PF
gi|94991077|ref|YP_599177.1| External link ts SF
  ts PF
gi|193213220|ref|YP_001999173.1| External link ev SF
  ev PF
gi|110677819|ref|YP_680826.1| External link 2r SF
  2r PF
gi|89895879|ref|YP_519366.1| External link d2 SF
  d2 PF No hits
gi|134300338|ref|YP_001113834.1| External link 0c SF
  0c PF
gi|53726221|ref|YP_103890.1| External link bi SF
  bi PF
gi|170754894|ref|YP_001782594.1| External link 8f SF
  8f PF