DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Homeodomain-like.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|163856247|ref|YP_001630545.1| External link 5y SF
  5y PF
30019.m000045 External link rk SF
  rk PF
gi|54024208|ref|YP_118450.1| External link nf SF
  nf PF
gi|182440444|ref|YP_001828163.1| External link 7n SF
  7n PF
gi|134100399|ref|YP_001106060.1| External link 18 SF
  18 PF
gi|158521611|ref|YP_001529481.1| External link 6c SF
  6c PF
gi|158520574|ref|YP_001528444.1| External link 6c SF
  6c PF
gi|75908493|ref|YP_322789.1| External link va SF
  va PF
gi|158334006|ref|YP_001515178.1| External link 81 SF
  81 PF
gi|37522436|ref|NP_925813.1| External link gv SF
  gv PF
gi|118470584|ref|YP_885261.1| External link 3e SF
  3e PF
29253.m000266 External link rk SF
  rk PF
30082.m000929 External link rk SF
  rk PF
jgi|Batde5|28790|fgenesh1_pg.C_scaffold_40000005 External link b9 SF
  b9 PF
gi|158422808|ref|YP_001524100.1| External link 75 SF
  75 PF
gi|120406322|ref|YP_956151.1| External link 28 SF
  28 PF
gi|15615977|ref|NP_244282.1| External link bh SF
  bh PF
gi|158315477|ref|YP_001507985.1| External link 6p SF
  6p PF
gi|89899814|ref|YP_522285.1| External link rx SF
  rx PF
gi|118462839|ref|YP_880860.1| External link 59 SF
  59 PF
gi|183983959|ref|YP_001852250.1| External link 8u SF
  8u PF
gi|118619074|ref|YP_907406.1| External link 5o SF
  5o PF
gi|41408454|ref|NP_961290.1| External link av SF
  av PF
gi|183982834|ref|YP_001851125.1| External link 8u SF
  8u PF
gi|118467736|ref|YP_888310.1| External link 3e SF
  3e PF
gi|118471966|ref|YP_886533.1| External link 3e SF
  3e PF
gi|111222848|ref|YP_713642.1| External link 1b SF
  1b PF
gi|41408756|ref|NP_961592.1| External link av SF
  av PF
gi|145224737|ref|YP_001135415.1| External link 4h SF
  4h PF
gi|118462674|ref|YP_880510.1| External link 59 SF
  59 PF
jgi|Brafl1|113435|fgenesh2_pg.scaffold_2888000002 External link bf SF
  bf PF
jgi|Poptr1_1|579309|eugene3.10580004 External link pt SF
  pt PF
41323 re SF
  re PF
gi|91787300|ref|YP_548252.1| External link p6 SF
  p6 PF
gi|157370785|ref|YP_001478774.1| External link 7e SF
  7e PF
gi|47527223|ref|YP_018572.1| External link b2 SF
  b2 PF
gi|121635353|ref|YP_975598.1| External link 19 SF
  19 PF
gi|116330047|ref|YP_799765.1| External link 3h SF
  3h PF
gi|41409816|ref|NP_962652.1| External link av SF
  av PF
gi|156934714|ref|YP_001438630.1| External link 69 SF
  69 PF
gi|73542679|ref|YP_297199.1| External link rl SF
  rl PF
gi|86358369|ref|YP_470261.1| External link rz SF
  rz PF
gi|30260556|ref|NP_842933.1| External link ba SF
  ba PF
gi|52142097|ref|YP_084727.1| External link x5 SF
  x5 PF
gi|169632019|ref|YP_001705668.1| External link 8c SF
  8c PF
gi|33593599|ref|NP_881243.1| External link be SF
  be PF
gi|170761285|ref|YP_001785971.1| External link 8s SF
  8s PF
gi|29827246|ref|NP_821880.1| External link s9 SF
  s9 PF
gi|82542957|ref|YP_406904.1| External link sq SF
  sq PF
gi|145223019|ref|YP_001133697.1| External link 4h SF
  4h PF