DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Homeodomain-like.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|121639773|ref|YP_979997.1| External link 07 SF
  07 PF
gi|148663723|ref|YP_001285246.1| External link 4q SF
  4q PF
gi|145596697|ref|YP_001160994.1| External link 1h SF
  1h PF No hits
gi|29831625|ref|NP_826259.1| External link s9 SF
  s9 PF
gi|89897550|ref|YP_521037.1| External link d2 SF
  d2 PF
gi|31795029|ref|NP_857522.1| External link mc SF
  mc PF
gi|15843486|ref|NP_338523.1| External link mu SF
  mu PF
gi|134097268|ref|YP_001102929.1| External link 18 SF
  18 PF
gi|118462781|ref|YP_884182.1| External link 59 SF
  59 PF
gi|118620041|ref|YP_908373.1| External link 5o SF
  5o PF
gi|183985374|ref|YP_001853665.1| External link 8u SF
  8u PF
gi|156740970|ref|YP_001431099.1| External link 77 SF
  77 PF
gi|94312713|ref|YP_585922.1| External link r4 SF
  r4 PF No hits
gi|148657933|ref|YP_001278138.1| External link 4a SF
  4a PF
gi|126433472|ref|YP_001069163.1| External link 22 SF
  22 PF
gi|118468283|ref|YP_890654.1| External link 3e SF
  3e PF
gi|32141187|ref|NP_627217.2| External link sf SF
  sf PF
gi|163848264|ref|YP_001636308.1| External link 6w SF
  6w PF
gi|159038126|ref|YP_001537379.1| External link 61 SF
  61 PF
gi|145221557|ref|YP_001132235.1| External link 4h SF
  4h PF
gi|15610991|ref|NP_218372.1| External link mb SF
  mb PF
gi|148825064|ref|YP_001289818.1| External link 51 SF
  51 PF
gi|158315837|ref|YP_001508345.1| External link 6p SF
  6p PF
gi|90023314|ref|YP_529141.1| External link d0 SF
  d0 PF
gi|154688087|ref|YP_001423248.1| External link 2o SF
  2o PF
gi|160901979|ref|YP_001567560.1| External link 6y SF
  6y PF
gi|125975149|ref|YP_001039059.1| External link 4x SF
  4x PF
gi|57866203|ref|YP_187843.1| External link ep SF
  ep PF
gi|54023936|ref|YP_118178.1| External link nf SF
  nf PF No hits
gi|82751949|ref|YP_417690.1| External link sk SF
  sk PF
gi|125625295|ref|YP_001033778.1| External link 39 SF
  39 PF
gi|182685170|ref|YP_001836917.1| External link 86 SF
  86 PF
gi|55821962|ref|YP_140404.1| External link sd SF
  sd PF
gi|118466308|ref|YP_882085.1| External link 59 SF
  59 PF
gi|118469996|ref|YP_888355.1| External link 3e SF
  3e PF
gi|169630503|ref|YP_001704152.1| External link 8c SF
  8c PF
gi|71911205|ref|YP_282755.1| External link zp SF
  zp PF
gi|118465132|ref|YP_884003.1| External link 59 SF
  59 PF No hits
gi|110799938|ref|YP_694821.1| External link 2f SF
  2f PF
gi|54023104|ref|YP_117346.1| External link nf SF
  nf PF
gi|15674231|ref|NP_268406.1| External link ll SF
  ll PF
gi|125717763|ref|YP_001034896.1| External link 5b SF
  5b PF
gi|170755368|ref|YP_001780514.1| External link 8f SF
  8f PF
gi|25010682|ref|NP_735077.1| External link s5 SF
  s5 PF
gi|116493653|ref|YP_805387.1| External link 1o SF
  1o PF
gi|169630676|ref|YP_001704325.1| External link 8c SF
  8c PF
gi|50913806|ref|YP_059778.1| External link sp SF
  sp PF No hits
gi|104774720|ref|YP_619700.1| External link ld SF
  ld PF
gi|50914787|ref|YP_060759.1| External link sp SF
  sp PF
gi|22124305|ref|NP_667728.1| External link yk SF
  yk PF