DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|37523028|ref|NP_926405.1| External link gv SF
  gv PF
gi|118581886|ref|YP_903136.1| External link 3c SF
  3c PF
gi|78222863|ref|YP_384610.1| External link gm SF
  gm PF
SJAG_02383 hj SF
  hj PF
gi|119385953|ref|YP_917008.1| External link 27 SF
  27 PF No hits
jgi|Brafl1|257689|e_gw.883.1.1 External link bf SF
  bf PF
gi|76801000|ref|YP_326008.1| External link np SF
  np PF
gi|110667026|ref|YP_656837.1| External link 1w SF
  1w PF
ENSDARP00000034945 External link df SF
  df PF
gi|147918983|ref|YP_687290.1| External link 3n SF
  3n PF
ENSORLP00000020543 External link o1 SF
  o1 PF
ENSDARP00000034945 External link da SF
  da PF
jgi|Brafl1|203076|e_gw.9.50.1 External link bf SF
  bf PF
jgi|Helro1|90419 External link hx SF
  hx PF
gi|57640856|ref|YP_183334.1| External link tk SF
  tk PF
ENSSARP00000005969 External link xr SF
  xr PF
ENSORLP00000020543 External link ol SF
  ol PF
gi|15897061|ref|NP_341666.1| External link ss SF
  ss PF
jgi|Lotgi1|207611|estExt_fgenesh2_pm.C_sca_1160003 External link gy SF
  gy PF
ENSSARP00000005969 External link xb SF
  xb PF
gi|16081655|ref|NP_394023.1| External link ta SF
  ta PF No hits
gi|187933046|ref|YP_001887385.1| External link 97 SF
  97 PF
gi|18309609|ref|NP_561543.1| External link cu SF
  cu PF
gi|110801960|ref|YP_697921.1| External link 5n SF
  5n PF
gi|110798829|ref|YP_695061.1| External link 2f SF
  2f PF
gi|28211358|ref|NP_782302.1| External link te SF
  te PF
gi|156973631|ref|YP_001444538.1| External link 65 SF
  65 PF
gi|147673497|ref|YP_001216465.1| External link 15 SF
  15 PF
gi|28897602|ref|NP_797207.1| External link vp SF
  vp PF
gi|27363663|ref|NP_759191.1| External link vv SF
  vv PF
gi|59711413|ref|YP_204189.1| External link vf SF
  vf PF
gi|15613657|ref|NP_241960.1| External link bh SF
  bh PF
gi|170287925|ref|YP_001738163.1| External link 92 SF
  92 PF
gi|167036687|ref|YP_001664265.1| External link 82 SF
  82 PF
gi|15642885|ref|NP_227926.1| External link tm SF
  tm PF
gi|15643571|ref|NP_228617.1| External link tm SF
  tm PF
gi|52082567|ref|YP_081358.1| External link lf SF
  lf PF
gi|37679194|ref|NP_933803.1| External link vb SF
  vb PF
gi|52787962|ref|YP_093791.1| External link lc SF
  lc PF
gi|110633860|ref|YP_674068.1| External link 0p SF
  0p PF
gi|146295734|ref|YP_001179505.1| External link 1q SF
  1q PF
gi|15896905|ref|NP_350254.1| External link ca SF
  ca PF
gi|167039407|ref|YP_001662392.1| External link 8d SF
  8d PF
gi|89895700|ref|YP_519187.1| External link d2 SF
  d2 PF
gi|29375167|ref|NP_814320.1| External link ef SF
  ef PF
gi|148269265|ref|YP_001243725.1| External link 0v SF
  0v PF
gi|15641008|ref|NP_230639.1| External link vc SF
  vc PF
gi|54308222|ref|YP_129242.1| External link he SF
  he PF
gi|150398148|ref|YP_001328615.1| External link 2m SF
  2m PF
gi|116749063|ref|YP_845750.1| External link 0l SF
  0l PF No hits