DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: C2H2 and C2HC zinc fingers.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
jgi|Capca1|75757|gw1.2103.2.1 External link i1 SF
  i1 PF
AAEL014554-PA External link a4 SF
  a4 PF
AAEL013321-PA External link a4 SF
  a4 PF
AAEL013321-PA External link ax SF
  ax PF
AAEL014554-PA External link ax SF
  ax PF
ENSCSAVP00000003097 External link c0 SF
  c0 PF
ENSCSAVP00000003097 External link i0 SF
  i0 PF
ENSCSAVP00000011297 External link c0 SF
  c0 PF
ENSCSAVP00000011297 External link i0 SF
  i0 PF
ENSCSAVP00000007528 External link c0 SF
  c0 PF
ENSCSAVP00000007528 External link i0 SF
  i0 PF
ENSCINP00000006352 External link it SF
  it PF
ENSCINP00000006352 External link is SF
  is PF
ENSCSAVP00000007531 External link c0 SF
  c0 PF
ENSCINP00000006308 External link is SF
  is PF
ENSCSAVP00000015115 External link c0 SF
  c0 PF
ENSCSAVP00000011298 External link c0 SF
  c0 PF
ENSCSAVP00000015116 External link i0 SF
  i0 PF
ENSCSAVP00000015116 External link c0 SF
  c0 PF
ENSCSAVP00000001235 External link c0 SF
  c0 PF
ENSCSAVP00000001235 External link i0 SF
  i0 PF
ENSSTOP00000009603 External link gb SF
  gb PF
ENSSTOP00000009603 External link g3 SF
  g3 PF
jgi|Brafl1|83455|fgenesh2_pg.scaffold_121000038 External link bf SF
  bf PF
ENSCSAVP00000015118 External link c0 SF
  c0 PF
jgi|Capca1|200699|fgenesh1_pg.C_scaffold_971000006 External link i1 SF
  i1 PF
jgi|Capca1|198317|fgenesh1_pg.C_scaffold_33000026 External link i1 SF
  i1 PF
jgi|Brafl1|243750|e_gw.431.13.1 External link bf SF
  bf PF
jgi|Brafl1|98113|fgenesh2_pg.scaffold_315000037 External link bf SF
  bf PF
ENSCSAVP00000007536 External link c0 SF
  c0 PF
ENSTBEP00000013603 External link tz SF
  tz PF
jgi|Capca1|146962|e_gw1.724.59.1 External link i1 SF
  i1 PF
ENSCSAVP00000007534 External link c0 SF
  c0 PF
ENSXETP00000041502 External link xn SF
  xn PF
ENSCSAVP00000000515 External link c0 SF
  c0 PF
ENSECAP00000002516 External link e5 SF
  e5 PF
ENSTBEP00000013603 External link t2 SF
  t2 PF
ENSECAP00000002516 External link eq SF
  eq PF
jgi|Lotgi1|194528|estExt_Genewise1.C_sca_600166 External link gy SF
  gy PF
ENSCINP00000001139 External link is SF
  is PF
jgi|Lotgi1|177976|fgenesh2_pm.C_sca_15000024 External link gy SF
  gy PF
ENSCSAVP00000000516 External link c0 SF
  c0 PF
ENSCSAVP00000011300 External link c0 SF
  c0 PF
ENSCSAVP00000000514 External link c0 SF
  c0 PF
ENSCINP00000001139 External link it SF
  it PF
ENSECAP00000021319 External link eq SF
  eq PF
ENSCSAVP00000000517 External link c0 SF
  c0 PF
jgi|Brafl1|67776|fgenesh2_pg.scaffold_16000076 External link bf SF
  bf PF
jgi|Brafl1|234007|e_gw.309.128.1 External link bf SF
  bf PF
jgi|Lotgi1|112013|e_gw1.14.396.1 External link gy SF
  gy PF