DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: C2H2 and C2HC zinc fingers.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
FBpp0254663 External link gw SF
  gw PF
Translation:13090 ie SF
  ie PF
ENSCSAVP00000011298 External link c0 SF
  c0 PF
ENSSTOP00000009603 External link g3 SF
  g3 PF
ENSSTOP00000009603 External link gb SF
  gb PF
ENSECAP00000002516 External link e5 SF
  e5 PF
ENSECAP00000002516 External link eq SF
  eq PF
ENSCSAVP00000011301 External link c0 SF
  c0 PF
jgi|Capca1|190437|fgenesh1_pg.C_scaffold_1198000004 External link i1 SF
  i1 PF
gi|115960591|ref|XP_001185094.1| External link tu SF
  tu PF
gi|115686413|ref|XP_001180116.1| External link tu SF
  tu PF
ENSEEUP00000003467 External link e4 SF
  e4 PF
ENSDNOP00000014216 External link d5 SF
  d5 PF
ENSMODP00000009762 External link op SF
  op PF
ENSEEUP00000003467 External link ek SF
  ek PF
ENSDNOP00000014216 External link d6 SF
  d6 PF
ENSLAFP00000011169 External link l1 SF
  l1 PF
ENSP00000326581 External link hs SF
  hs PF
ENSRNOP00000040441 External link rn SF
  rn PF
ENSPTRP00000019845 External link xp SF
  xp PF
ENSP00000326581 External link ht SF
  ht PF
ENSLAFP00000011169 External link lk SF
  lk PF
ENSP00000338168 External link hs SF
Gene name: ZIM2  hs PF
ENSPTRP00000054226 External link xp SF
  xp PF
ENSMLUP00000007254 External link lu SF
  lu PF
ENSMLUP00000007254 External link l2 SF
  l2 PF
ENSOANP00000002481 External link oh SF
  oh PF
ENSPPYP00000011713 External link o5 SF
  o5 PF
ENSPPYP00000011713 External link of SF
  of PF
ENSPTRP00000054225 External link xp SF
  xp PF
ENSPTRP00000019844 External link xp SF
  xp PF
FBpp0126405 External link dk SF
  dk PF
ENSLAFP00000012713 External link l1 SF
  l1 PF
ENSFCAP00000013641 External link f1 SF
  f1 PF
ENSLAFP00000012713 External link lk SF
  lk PF
ENSFCAP00000013641 External link fe SF
  fe PF
ENSPTRP00000019844 External link xq SF
  xq PF
ENSMODP00000030604 External link op SF
  op PF
ENSMMUP00000039063 External link r2 SF
  r2 PF
ENSCPOP00000002537 External link g2 SF
  g2 PF
ENSMICP00000008657 External link i2 SF
  i2 PF
ENSMMUP00000041369 External link r2 SF
  r2 PF
ENSPPYP00000015618 External link o5 SF
  o5 PF
ENSMMUP00000035965 External link ru SF
  ru PF
ENSCPOP00000002537 External link gu SF
  gu PF
ENSETEP00000005706 External link ee SF
  ee PF
ENSMUSP00000032820 External link mm SF
Gene name: Zfp187  mm PF
ENSMMUP00000041369 External link ru SF
  ru PF
ENSMUSP00000106111 External link mm SF
  mm PF
ENSETEP00000005706 External link e3 SF
  e3 PF