DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


Details Genome DB Domain architecture
gi|83590439|ref|YP_430448.1| External link m8 SF
  m8 PF No hits
gi|78355575|ref|YP_387024.1| External link ds SF
  ds PF No hits
gi|116751455|ref|YP_848142.1| External link 0l SF
  0l PF No hits
gi|169832336|ref|YP_001718318.1| External link 7u SF
  7u PF No hits
gi|120603573|ref|YP_967973.1| External link 0t SF
  0t PF No hits
gi|46578820|ref|YP_009628.1| External link dv SF
  dv PF No hits
gi|158522681|ref|YP_001530551.1| External link 6c SF
  6c PF No hits
gi|11498037|ref|NP_069261.1| External link af SF
  af PF No hits
gi|51244651|ref|YP_064535.1| External link dp SF
  dp PF No hits