DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Homeodomain-like.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|56964701|ref|YP_176432.1| External link x4 SF
  x4 PF
gi|108800704|ref|YP_640901.1| External link yb SF
  yb PF
gi|124268883|ref|YP_001022887.1| External link 14 SF
  14 PF
gi|134102936|ref|YP_001108597.1| External link 18 SF
  18 PF
gi|119869843|ref|YP_939795.1| External link 46 SF
  46 PF
gi|158425312|ref|YP_001526604.1| External link 75 SF
  75 PF
gi|115359483|ref|YP_776621.1| External link 0u SF
  0u PF
gi|154249228|ref|YP_001410053.1| External link 3l SF
  3l PF
gi|161510871|ref|YP_001576530.1| External link 6o SF
  6o PF
gi|49487444|ref|YP_044665.1| External link ar SF
  ar PF
gi|49484860|ref|YP_042084.1| External link a0 SF
  a0 PF
gi|91790594|ref|YP_551546.1| External link p6 SF
  p6 PF
gi|49478286|ref|YP_037674.1| External link ko SF
  ko PF
gi|119714487|ref|YP_921452.1| External link 0j SF
  0j PF
gi|189909855|ref|YP_001961410.1| External link f2 SF
  f2 PF
gi|87160057|ref|YP_495233.1| External link a2 SF
  a2 PF
gi|145224963|ref|YP_001135641.1| External link 4h SF
  4h PF
gi|15925655|ref|NP_373189.1| External link sa SF
  sa PF
gi|116494517|ref|YP_806251.1| External link 1o SF
  1o PF
gi|49186394|ref|YP_029646.1| External link b0 SF
  b0 PF
gi|150395180|ref|YP_001317855.1| External link 1i SF
  1i PF
gi|162456163|ref|YP_001618530.1| External link 60 SF
  60 PF
gi|118620019|ref|YP_908351.1| External link 5o SF
  5o PF
gi|52141942|ref|YP_084887.1| External link x5 SF
  x5 PF
gi|82752243|ref|YP_417984.1| External link sk SF
  sk PF
gi|156980980|ref|YP_001443239.1| External link 71 SF
  71 PF
gi|15928251|ref|NP_375784.1| External link s2 SF
  s2 PF
gi|21284314|ref|NP_647402.1| External link s1 SF
  s1 PF
gi|154253098|ref|YP_001413922.1| External link 1e SF
  1e PF
gi|118478837|ref|YP_895988.1| External link 31 SF
  31 PF
gi|57652405|ref|YP_187475.1| External link x8 SF
  x8 PF
gi|187934023|ref|YP_001884860.1| External link 97 SF
  97 PF
gi|148269098|ref|YP_001248041.1| External link 2c SF
  2c PF
gi|88196620|ref|YP_501450.1| External link aq SF
  aq PF
gi|148642710|ref|YP_001273223.1| External link 1p SF
  1p PF
gi|78063236|ref|YP_373144.1| External link bk SF
  bk PF
gi|191637954|ref|YP_001987120.1| External link 95 SF
  95 PF
gi|183219719|ref|YP_001837715.1| External link 83 SF
  83 PF
gi|41406299|ref|NP_959135.1| External link av SF
  av PF
gi|54024913|ref|YP_119155.1| External link nf SF
  nf PF
gi|151222776|ref|YP_001333598.1| External link 5p SF
  5p PF
gi|118463146|ref|YP_879491.1| External link 59 SF
  59 PF
gi|119718463|ref|YP_925428.1| External link 0j SF
  0j PF
gi|118466264|ref|YP_883354.1| External link 59 SF
  59 PF