DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: HLH, helix-loop-helix DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
FBpp0214695 External link dw SF
  dw PF
ENSSARP00000002135 External link xr SF
  xr PF
Gm0025x00645 yg SF
  yg PF
Gm0142x00126 yg SF
  yg PF
AC204615.2_FGT012 External link ze SF
  ze PF No hits
Gm0077x00126 yg SF
  yg PF No hits
jgi|Poptr1_1|201956|gw1.IX.2421.1 External link pt SF
  pt PF No hits
evm.TU.supercontig_388.7 r6 SF
  r6 PF
LOC_Os04g41570.3|12004.m101563|protein External link os SF
  os PF No hits
ENSCSAVP00000019402 External link c0 SF
  c0 PF
evm.TU.supercontig_106.107 r6 SF
  r6 PF No hits
AC209758.1_FGT027 External link ze SF
  ze PF
AT3G22100.1 External link ad SF
  ad PF
130874 External link sj SF
  sj PF
IMGA|AC135100_21.1 External link mw SF
  mw PF No hits
jgi|Phypa1_1|89997|fgenesh1_pg.scaffold_191000023 External link pw SF
  pw PF No hits
LOC_Os01g43680.3|12001.m150660|protein External link os SF
  os PF No hits
LOC_Os06g44320.1|12006.m08960|protein External link os SF
  os PF No hits
Gm0003x00491 yg SF
  yg PF No hits
jgi|Poptr1_1|658647|grail3.0006012101 External link pt SF
  pt PF No hits
29693.m002046 External link rk SF
  rk PF
GSVIVP00018021001 vt SF
  vt PF No hits
GSVIVP00007708001 vt SF
  vt PF No hits
Gm0022x00682 yg SF
  yg PF No hits
jgi|Poptr1_1|561311|eugene3.00061270 External link pt SF
  pt PF
AT4G00120.1 External link at SF
  at PF
AT1G26945.1 External link ad SF
  ad PF
AC200470.3_FGT004 External link ze SF
  ze PF No hits
LOC_Os04g41570.1|12004.m09135|protein External link os SF
  os PF No hits
jgi|Poptr1_1|657057|grail3.0010070401 External link pt SF
  pt PF No hits
jgi|Poptr1_1|656738|grail3.0010043001 External link pt SF
  pt PF No hits
AC204699.2_FGT018 External link ze SF
  ze PF No hits
Gm0085x00073 yg SF
  yg PF
LOC_Os06g41060.1|12006.m08641|protein External link os SF
  os PF No hits
jgi|Poptr1_1|594423|eugene3.00640011 External link pt SF
  pt PF
jgi|Sorbi1|5050114|Sb01g045710 External link oj SF
  oj PF
jgi|Sorbi1|5061926|Sb10g024110 External link oj SF
  oj PF No hits
LOC_Os08g08160.1|12008.m04951|protein External link os SF
  os PF No hits
AC211862.1_FGT016 External link ze SF
  ze PF No hits
jgi|Phypa1_1|100170|fgenesh1_pg.scaffold_412000024 External link pw SF
  pw PF No hits
jgi|Sorbi1|5030115|Sb01g039210 External link oj SF
  oj PF No hits
LOC_Os04g41570.2|12004.m35357|protein External link os SF
  os PF No hits
AC189770.3_FGT026 External link ze SF
  ze PF No hits
LOC_Os01g43680.1|12001.m10630|protein External link os SF
  os PF No hits
jgi|Poptr1_1|805855|fgenesh4_pm.C_LG_XI000130 External link pt SF
  pt PF
LOC_Os03g55550.1|12003.m10468|protein External link os SF
  os PF
jgi|Poptr1_1|566573|eugene3.00101131 External link pt SF
  pt PF
AC210259.1_FGT010 External link ze SF
  ze PF
jgi|Poptr1_1|559634|eugene3.00051249 External link pt SF
  pt PF
AT4G00120.1 External link ad SF
  ad PF