DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: SBT domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


Details Genome DB Domain architecture
AC195335.2_FGT012 External link ze SF
  ze PF
Gm0144x10035 yg SF
  yg PF
LOC_Os01g18850.4|12001.m150557|protein External link os SF
  os PF
jgi|Poptr1_1|656549|grail3.0010026901 External link pt SF
  pt PF
jgi|Poptr1_1|594656|eugene3.00640244 External link pt SF
  pt PF No hits
jgi|Chlre3|106739|e_gwH.46.36.1 External link cy SF
  cy PF No hits
evm.TU.supercontig_181.10 r6 SF
  r6 PF
jgi|ChlNC64A_1|135230|IGS.gm_13_00158 External link h2 SF
  h2 PF
AC186334.4_FGT019 External link ze SF
  ze PF
LOC_Os01g18850.3|12001.m42976|protein External link os SF
  os PF
AC209443.1_FGT006 External link ze SF
  ze PF
jgi|Chlre3|108444|e_gwH.81.18.1 External link cy SF
  cy PF No hits
jgi|ChlNC64A_1|51260|fgenesh3_pg.C_scaffold_6000074 External link h2 SF
  h2 PF
AC192233.2_FGT015 External link ze SF
  ze PF No hits
jgi|ChlNC64A_1|144701|IGS.gm_8_00029 External link h2 SF
  h2 PF No hits
jgi|ChlNC64A_1|141274|IGS.gm_32_00112 External link h2 SF
  h2 PF No hits
LOC_Os01g18850.2|12001.m42643|protein External link os SF
  os PF
jgi|ChlNC64A_1|133643|IGS.gm_1_00779 External link h2 SF
  h2 PF No hits
jgi|ChlNC64A_1|138661|IGS.gm_21_00140 External link h2 SF
  h2 PF No hits
Gm0053x00251 yg SF
  yg PF
Gm0012x00137 yg SF
  yg PF
AC197583.1_FGT017 External link ze SF
  ze PF
LOC_Os01g18850.1|12001.m08422|protein External link os SF
  os PF
jgi|ChlNC64A_1|139850|IGS.gm_27_00028 External link h2 SF
  h2 PF
Gm0061x00098 yg SF
  yg PF