DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: SBT domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
AC192587.3_FGT011 External link ze SF
  ze PF
jgi|Volca1|58461|e_gw1.10.148.1 External link vo SF
  vo PF
jgi|Selmo1|437670|estExt_fgenesh2_pg.C_00995 External link gj SF
  gj PF
IMGA|AC144728_3.1 External link mw SF
  mw PF
AC197006.2_FGT008 External link ze SF
  ze PF
Gm0010x00520 yg SF
  yg PF
jgi|Chlre3|148821|Chlre2_kg.scaffold_24000220 External link cy SF
  cy PF No hits
IMGA|AC136840_14.1 External link mw SF
  mw PF
jgi|ChlNC64A_1|49863|fgenesh3_pg.C_scaffold_2000108 External link h2 SF
  h2 PF
AT2G47070.1 External link ad SF
  ad PF
29889.m003388 External link rk SF
  rk PF
evm.TU.supercontig_146.32 r6 SF
  r6 PF
AP004975_15.1 External link jp SF
  jp PF
jgi|Sorbi1|5047795|Sb01g002530 External link oj SF
  oj PF
30076.m004574 External link rk SF
  rk PF
AC186166.3_FGT001 External link ze SF
  ze PF
AT2G47070.1 External link at SF
  at PF
Gm0168x00068 yg SF
  yg PF
jgi|Volca1|80184|estExt_Genewise1Plus.C_100004 External link vo SF
  vo PF
jgi|Poptr1_1|226094|gw1.X.791.1 External link pt SF
  pt PF
jgi|Chlre3|191464|estExt_fgenesh2_pg.C_230178 External link cy SF
  cy PF No hits
jgi|ChlNC64A_1|133755|IGS.gm_10_00046 External link h2 SF
  h2 PF
LOC_Os03g61760.1|12003.m11057|protein External link os SF
  os PF
Gm0025x00302 yg SF
  yg PF
AC177926.2_FGT033 External link ze SF
  ze PF
AT3G60030.1 External link at SF
  at PF
AT1G20980.1 External link ad SF
  ad PF
GSVIVP00028195001 vt SF
  vt PF
AT3G60030.1 External link ad SF
  ad PF
AT1G20980.1 External link at SF
  at PF
AP004965_9.1 External link jp SF
  jp PF
Gm0068x00396 yg SF
  yg PF No hits
jgi|ChlNC64A_1|136317|IGS.gm_16_00040 External link h2 SF
  h2 PF
AC195335.2_FGT012 External link ze SF
  ze PF
jgi|Volca1|93794|fgenesh4_pg.C_scaffold_33000155 External link vo SF
  vo PF
AT1G53160.1 External link ad SF
  ad PF
Gm0128x00143 yg SF
  yg PF
IMGA|AC146855_13.1 External link mw SF
  mw PF
evm.TU.supercontig_2783.1 r6 SF
  r6 PF
LOC_Os06g45310.1|12006.m09058|protein External link os SF
  os PF
AT5G50570.1 External link at SF
  at PF
jgi|Poptr1_1|570289|eugene3.00120942 External link pt SF
  pt PF
IMGA|CT737180_3.1 External link mw SF
  mw PF
GSVIVP00019711001 vt SF
  vt PF
jgi|Chlre3|165760|fgenesh2_pg.C_scaffold_8000037 External link cy SF
  cy PF No hits
AC191524.3_FGT015 External link ze SF
  ze PF
AC197570.2_FGT017 External link ze SF
  ze PF No hits
jgi|Poptr1_1|235814|gw1.XI.3794.1 External link pt SF
  pt PF
jgi|Sorbi1|5037662|Sb04g005180 External link oj SF
  oj PF
jgi|Poptr1_1|179183|gw1.I.7783.1 External link pt SF
  pt PF